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  5. Seita.4G116600.1

Seita.4G116600.1


Description : BBX class-III transcription factor


Gene families : OG_42_0000843 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000843_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G116600.1
Cluster HCAA Clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
At1g07050 No alias CCT motif family protein [Source:TAIR;Acc:AT1G07050] 0.03 Orthogroups_2024-Update
Bradi1g11310 No alias B-box type zinc finger protein with CCT domain 0.02 Orthogroups_2024-Update
Bradi3g57000 No alias B-box type zinc finger protein with CCT domain 0.03 Orthogroups_2024-Update
HORVU7Hr1G074960.2 No alias CMF transcription factor 0.03 Orthogroups_2024-Update
MA_91504g0010 No alias (at5g14370 : 99.8) CCT motif family protein; LOCATED IN:... 0.02 Orthogroups_2024-Update
PSME_00025347-RA No alias (at1g25440 : 88.6) B-box type zinc finger protein with... 0.03 Orthogroups_2024-Update
Potri.015G054600 No alias B-box type zinc finger protein with CCT domain 0.04 Orthogroups_2024-Update
Pp1s108_97V6 No alias zinc finger protein constans-like 16 0.02 Orthogroups_2024-Update
Pp1s109_40V6 No alias Putative zinc finger protein CONSTANS-LIKE 7... 0.03 Orthogroups_2024-Update
Pp1s12_404V6 No alias No description available 0.02 Orthogroups_2024-Update
Sobic.004G249500.1 No alias BBX class-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G108500.1 No alias BBX class-III transcription factor 0.04 Orthogroups_2024-Update
Sopen02g038060 No alias CCT motif 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004334 fumarylacetoacetase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Predicted GO
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 390 432
IPR000315 Znf_B-box 22 64
No external refs found!