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  5. Seita.4G156200.1

Seita.4G156200.1


Description : GARP subgroup GLK transcription factor


Gene families : OG_42_0003250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G156200.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
At5g44190 No alias Transcription activator GLK2... 0.04 Orthogroups_2024-Update
Brara.F03760.1 No alias GARP subgroup GLK transcription factor 0.04 Orthogroups_2024-Update
Glyma.06G289300 No alias GBF\'s pro-rich region-interacting factor 1 0.04 Orthogroups_2024-Update
Glyma.12G117700 No alias GBF\'s pro-rich region-interacting factor 1 0.04 Orthogroups_2024-Update
Kfl00316_0100 kfl00316_0100_v1.1 (at2g20570 : 171.0) Encodes GLK1, Golden2-like 1, one of... 0.03 Orthogroups_2024-Update
LOC_Os06g24070 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_78829g0010 No alias (at2g20570 : 260.0) Encodes GLK1, Golden2-like 1, one of... 0.02 Orthogroups_2024-Update
Potri.007G136900 No alias GBF\'s pro-rich region-interacting factor 1 0.02 Orthogroups_2024-Update
Potri.T098900 No alias GBF\'s pro-rich region-interacting factor 1 0.03 Orthogroups_2024-Update
Pp1s31_317V6 No alias Golden 2-like protein 2 0.05 Orthogroups_2024-Update
Sobic.003G002600.1 No alias GARP subgroup GLK transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G096300.1 No alias GARP subgroup GLK transcription factor 0.03 Orthogroups_2024-Update
Solyc07g053630 No alias Two-component response regulator-like APRR2 (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen10g004030 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 180 229
No external refs found!