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  5. Seita.4G242600.1

Seita.4G242600.1


Description : Unknown function


Gene families : OG_42_0013473 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0013473_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G242600.1
Cluster HCAA Clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Bradi1g34110 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Sobic.010G250500.1 No alias Unknown function 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 173 219
IPR002885 Pentatricopeptide_repeat 41 65
IPR002885 Pentatricopeptide_repeat 311 339
IPR002885 Pentatricopeptide_repeat 72 89
IPR002885 Pentatricopeptide_repeat 348 372
IPR002885 Pentatricopeptide_repeat 248 270
IPR002885 Pentatricopeptide_repeat 276 306
No external refs found!