Coexpression cluster: Cluster_54 (HCAA Clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008270 zinc ion binding 11.3% (26/230) 3.13 0.0 0.0
GO:0046914 transition metal ion binding 11.3% (26/230) 2.02 0.0 0.0
GO:0003723 RNA binding 8.26% (19/230) 2.33 0.0 1e-06
GO:0003676 nucleic acid binding 14.78% (34/230) 1.52 0.0 3e-06
GO:0016866 intramolecular transferase activity 2.17% (5/230) 4.8 1e-06 4.3e-05
GO:0043169 cation binding 12.17% (28/230) 1.49 1e-06 4.8e-05
GO:0046872 metal ion binding 12.17% (28/230) 1.5 1e-06 5.4e-05
GO:0009982 pseudouridine synthase activity 1.74% (4/230) 5.14 4e-06 0.00016
GO:0016853 isomerase activity 3.48% (8/230) 3.1 5e-06 0.000161
GO:0090304 nucleic acid metabolic process 6.96% (16/230) 1.98 4e-06 0.000166
GO:0001522 pseudouridine synthesis 1.74% (4/230) 4.84 1e-05 0.000322
GO:0009451 RNA modification 2.17% (5/230) 3.94 1.9e-05 0.000488
GO:0006139 nucleobase-containing compound metabolic process 7.39% (17/230) 1.73 1.8e-05 0.000501
GO:0003916 DNA topoisomerase activity 1.3% (3/230) 5.5 3.4e-05 0.000761
GO:0006265 DNA topological change 1.3% (3/230) 5.5 3.4e-05 0.000761
GO:0006725 cellular aromatic compound metabolic process 7.39% (17/230) 1.59 6e-05 0.001194
GO:0046483 heterocycle metabolic process 7.39% (17/230) 1.6 5.7e-05 0.001198
GO:1901360 organic cyclic compound metabolic process 7.39% (17/230) 1.57 7.3e-05 0.001377
GO:0016070 RNA metabolic process 4.78% (11/230) 2.03 9.7e-05 0.001722
GO:0071103 DNA conformation change 1.3% (3/230) 4.57 0.00026 0.004407
GO:0034641 cellular nitrogen compound metabolic process 8.26% (19/230) 1.31 0.000291 0.004704
GO:0005488 binding 33.04% (76/230) 0.49 0.000623 0.009596
GO:0010628 positive regulation of gene expression 0.87% (2/230) 5.23 0.001201 0.013133
GO:0031328 positive regulation of cellular biosynthetic process 0.87% (2/230) 5.23 0.001201 0.013133
GO:0009891 positive regulation of biosynthetic process 0.87% (2/230) 5.23 0.001201 0.013133
GO:0010557 positive regulation of macromolecule biosynthetic process 0.87% (2/230) 5.23 0.001201 0.013133
GO:0010604 positive regulation of macromolecule metabolic process 0.87% (2/230) 5.23 0.001201 0.013133
GO:0051173 positive regulation of nitrogen compound metabolic process 0.87% (2/230) 5.23 0.001201 0.013133
GO:0009893 positive regulation of metabolic process 0.87% (2/230) 5.23 0.001201 0.013133
GO:0031325 positive regulation of cellular metabolic process 0.87% (2/230) 5.23 0.001201 0.013133
GO:0003690 double-stranded DNA binding 1.74% (4/230) 3.12 0.001174 0.01731
GO:0043167 ion binding 18.26% (42/230) 0.63 0.002546 0.026976
GO:0006396 RNA processing 2.17% (5/230) 2.25 0.00421 0.043253
GO:0048522 positive regulation of cellular process 0.87% (2/230) 4.33 0.004367 0.043546
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_38 0.057 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_43 0.036 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_54 0.024 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_63 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_94 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_96 0.038 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_105 0.038 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_129 0.03 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_152 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_176 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_11 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_14 0.024 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_29 0.039 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_43 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_46 0.025 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_71 0.024 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_107 0.042 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_122 0.019 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_125 0.043 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_162 0.029 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_194 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_412 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_19 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_56 0.034 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_108 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_132 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_155 0.02 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_146 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_7 0.019 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_187 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_151 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_205 0.021 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_8 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_111 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_179 0.022 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_185 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_19 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_25 0.032 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_40 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_54 0.063 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_59 0.037 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.032 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_76 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_78 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_84 0.037 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_132 0.035 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_138 0.026 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_144 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_153 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_227 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_109 0.038 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_158 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_170 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_173 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_278 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_289 0.042 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_311 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_338 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_345 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_374 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_393 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_421 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_442 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_459 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_526 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_89 0.025 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_99 0.022 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_9 0.059 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_65 0.033 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_67 0.022 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_90 0.028 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_107 0.027 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_115 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_153 0.03 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_225 0.021 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0005 0.045 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0012 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0043 0.025 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0059 0.037 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0060 0.022 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0068 0.027 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0072 0.027 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0075 0.035 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0084 0.024 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0085 0.022 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0100 0.022 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0110 0.019 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0112 0.021 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0117 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0002 0.033 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0024 0.026 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0036 0.062 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0059 0.027 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0065 0.027 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0083 0.031 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0096 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0105 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0106 0.033 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0123 0.032 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0129 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0130 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0158 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0172 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0181 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_6 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_23 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_32 0.028 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_57 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_66 0.044 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_157 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_197 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_212 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_264 0.036 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_26 0.041 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_27 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_28 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_33 0.032 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_45 0.028 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_51 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_59 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_66 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_86 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_97 0.026 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_109 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_112 0.027 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_117 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_122 0.026 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_125 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_142 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_146 0.026 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_178 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_204 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_231 0.019 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_297 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_298 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_1 0.036 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_6 0.028 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_13 0.059 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_17 0.099 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_65 0.043 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_66 0.034 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_87 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_89 0.042 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_113 0.042 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_127 0.036 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_129 0.028 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_138 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_144 0.031 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_159 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_174 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_196 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_216 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_247 0.03 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_259 0.043 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_28 0.026 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_169 0.02 Orthogroups_2024-Update Compare
Sequences (230) (download table)

InterPro Domains

GO Terms

Family Terms