Coexpression cluster: Cluster_297 (HCAA Clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 24.07% (13/54) 2.32 1e-06 0.000351
GO:1901363 heterocyclic compound binding 37.04% (20/54) 1.47 1e-05 0.000894
GO:0097159 organic cyclic compound binding 37.04% (20/54) 1.47 1e-05 0.000894
GO:0019001 guanyl nucleotide binding 7.41% (4/54) 3.78 0.000213 0.003796
GO:0034641 cellular nitrogen compound metabolic process 16.67% (9/54) 2.11 0.000201 0.003839
GO:0032550 purine ribonucleoside binding 7.41% (4/54) 3.8 0.000199 0.004077
GO:0032549 ribonucleoside binding 7.41% (4/54) 3.8 0.000199 0.004077
GO:0001883 purine nucleoside binding 7.41% (4/54) 3.8 0.000199 0.004077
GO:0005525 GTP binding 7.41% (4/54) 3.8 0.000199 0.004077
GO:0001882 nucleoside binding 7.41% (4/54) 3.8 0.000199 0.004077
GO:0032561 guanyl ribonucleotide binding 7.41% (4/54) 3.8 0.000199 0.004077
GO:0006725 cellular aromatic compound metabolic process 12.96% (7/54) 2.46 0.000261 0.004352
GO:0046483 heterocycle metabolic process 12.96% (7/54) 2.43 0.000296 0.004656
GO:1901360 organic cyclic compound metabolic process 12.96% (7/54) 2.42 0.000316 0.004683
GO:0005488 binding 44.44% (24/54) 1.09 8.9e-05 0.00473
GO:0019843 rRNA binding 5.56% (3/54) 5.23 7.3e-05 0.004878
GO:0035639 purine ribonucleoside triphosphate binding 18.52% (10/54) 1.82 0.000454 0.006378
GO:0090304 nucleic acid metabolic process 11.11% (6/54) 2.83 0.000198 0.007543
GO:0003723 RNA binding 11.11% (6/54) 2.86 0.000177 0.007855
GO:0006139 nucleobase-containing compound metabolic process 11.11% (6/54) 2.38 0.001003 0.013389
GO:0006807 nitrogen compound metabolic process 24.07% (13/54) 1.32 0.001515 0.01498
GO:0017076 purine nucleotide binding 18.52% (10/54) 1.56 0.001733 0.015426
GO:0006364 rRNA processing 3.7% (2/54) 5.13 0.001507 0.01548
GO:0016072 rRNA metabolic process 3.7% (2/54) 5.13 0.001507 0.01548
GO:0044427 chromosomal part 3.7% (2/54) 5.13 0.001507 0.01548
GO:0032553 ribonucleotide binding 18.52% (10/54) 1.56 0.001802 0.015517
GO:0032555 purine ribonucleotide binding 18.52% (10/54) 1.57 0.001697 0.015628
GO:0005785 signal recognition particle receptor complex 1.85% (1/54) 9.52 0.001359 0.015777
GO:0030915 Smc5-Smc6 complex 1.85% (1/54) 9.52 0.001359 0.015777
GO:0106068 SUMO ligase complex 1.85% (1/54) 9.52 0.001359 0.015777
GO:0097367 carbohydrate derivative binding 18.52% (10/54) 1.55 0.001894 0.015805
GO:0006259 DNA metabolic process 5.56% (3/54) 3.68 0.001681 0.016031
GO:0043170 macromolecule metabolic process 22.22% (12/54) 1.33 0.002231 0.018047
GO:0034311 diol metabolic process 1.85% (1/54) 8.52 0.002716 0.018131
GO:0006729 tetrahydrobiopterin biosynthetic process 1.85% (1/54) 8.52 0.002716 0.018131
GO:0034312 diol biosynthetic process 1.85% (1/54) 8.52 0.002716 0.018131
GO:0000009 alpha-1,6-mannosyltransferase activity 1.85% (1/54) 8.52 0.002716 0.018131
GO:0005047 signal recognition particle binding 1.85% (1/54) 8.52 0.002716 0.018131
GO:0046146 tetrahydrobiopterin metabolic process 1.85% (1/54) 8.52 0.002716 0.018131
GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity 1.85% (1/54) 8.52 0.002716 0.018131
GO:0003677 DNA binding 11.11% (6/54) 2.06 0.003027 0.019712
GO:0009987 cellular process 25.93% (14/54) 1.12 0.003637 0.021108
GO:0003674 molecular_function 53.7% (29/54) 0.62 0.003578 0.021232
GO:1901265 nucleoside phosphate binding 18.52% (10/54) 1.42 0.003531 0.021425
GO:0000166 nucleotide binding 18.52% (10/54) 1.42 0.003531 0.021425
GO:0044237 cellular metabolic process 24.07% (13/54) 1.19 0.003404 0.02164
GO:0004376 glycolipid mannosyltransferase activity 1.85% (1/54) 7.94 0.004072 0.023131
GO:0036094 small molecule binding 18.52% (10/54) 1.37 0.004587 0.025513
GO:0043168 anion binding 18.52% (10/54) 1.36 0.004736 0.025807
GO:0046165 alcohol biosynthetic process 1.85% (1/54) 7.52 0.005425 0.027331
GO:0046173 polyol biosynthetic process 1.85% (1/54) 7.52 0.005425 0.027331
GO:0042559 pteridine-containing compound biosynthetic process 1.85% (1/54) 7.52 0.005425 0.027331
GO:0034470 ncRNA processing 3.7% (2/54) 4.22 0.005223 0.027893
GO:0032991 protein-containing complex 11.11% (6/54) 1.87 0.00574 0.028381
GO:0061505 DNA topoisomerase II activity 1.85% (1/54) 7.2 0.006777 0.031745
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 1.85% (1/54) 7.2 0.006777 0.031745
GO:0000030 mannosyltransferase activity 1.85% (1/54) 7.2 0.006777 0.031745
GO:0042558 pteridine-containing compound metabolic process 1.85% (1/54) 6.94 0.008127 0.036166
GO:0008094 DNA-dependent ATPase activity 1.85% (1/54) 6.94 0.008127 0.036166
GO:0006281 DNA repair 3.7% (2/54) 3.89 0.008083 0.03721
GO:0033554 cellular response to stress 3.7% (2/54) 3.82 0.008886 0.03766
GO:0051716 cellular response to stimulus 3.7% (2/54) 3.82 0.008886 0.03766
GO:0006974 cellular response to DNA damage stimulus 3.7% (2/54) 3.82 0.008886 0.03766
GO:0071704 organic substance metabolic process 24.07% (13/54) 1.0 0.010474 0.043697
GO:0032040 small-subunit processome 1.85% (1/54) 6.52 0.010822 0.043779
GO:1901617 organic hydroxy compound biosynthetic process 1.85% (1/54) 6.52 0.010822 0.043779
GO:0044422 organelle part 5.56% (3/54) 2.7 0.011163 0.043832
GO:0044446 intracellular organelle part 5.56% (3/54) 2.7 0.011163 0.043832
GO:0000049 tRNA binding 1.85% (1/54) 6.35 0.012166 0.047078
GO:0044260 cellular macromolecule metabolic process 16.67% (9/54) 1.23 0.012925 0.049301
GO:0006265 DNA topological change 1.85% (1/54) 6.2 0.013509 0.04941
GO:0003916 DNA topoisomerase activity 1.85% (1/54) 6.2 0.013509 0.04941
GO:0030684 preribosome 1.85% (1/54) 6.2 0.013509 0.04941
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_26 0.037 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_38 0.033 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_96 0.023 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_177 0.023 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_224 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_29 0.041 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_164 0.029 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_175 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.03 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_122 0.029 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_142 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_155 0.038 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_8 0.032 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_87 0.029 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_122 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.025 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.036 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_80 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_76 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_109 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_385 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_396 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_444 0.04 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_453 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_492 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_524 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_53 0.024 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_105 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_159 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_13 0.033 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_79 0.027 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_108 0.025 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_41 0.019 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_107 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_130 0.025 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_225 0.021 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0059 0.024 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0075 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0002 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0024 0.047 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0067 0.026 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0072 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0083 0.026 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0117 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_58 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_75 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_106 0.051 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_181 0.035 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_220 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_338 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_339 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_385 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_145 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_66 0.032 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_89 0.032 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_113 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_163 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_164 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_174 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_207 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_259 0.03 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_28 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_45 0.032 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_54 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_56 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_138 0.034 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_44 0.024 Orthogroups_2024-Update Compare
Sequences (54) (download table)

InterPro Domains

GO Terms

Family Terms