Coexpression cluster: Cluster_108 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030684 preribosome 4.29% (3/70) 7.05 1e-06 0.00022
GO:0034470 ncRNA processing 5.71% (4/70) 4.63 2.1e-05 0.001265
GO:0006396 RNA processing 7.14% (5/70) 3.95 1.8e-05 0.001662
GO:0015696 ammonium transport 2.86% (2/70) 7.14 7.9e-05 0.002388
GO:0008519 ammonium transmembrane transporter activity 2.86% (2/70) 7.14 7.9e-05 0.002388
GO:0003674 molecular_function 42.86% (30/70) 0.99 5.3e-05 0.002413
GO:0032040 small-subunit processome 2.86% (2/70) 6.88 0.000118 0.003065
GO:0003676 nucleic acid binding 12.86% (9/70) 2.16 0.000178 0.004061
GO:0034660 ncRNA metabolic process 5.71% (4/70) 3.79 0.000204 0.004121
GO:0097159 organic cyclic compound binding 20.0% (14/70) 1.53 0.000271 0.004492
GO:1901363 heterocyclic compound binding 20.0% (14/70) 1.53 0.000271 0.004492
GO:0000166 nucleotide binding 14.29% (10/70) 1.73 0.000804 0.010453
GO:1901265 nucleoside phosphate binding 14.29% (10/70) 1.73 0.000804 0.010453
GO:0016070 RNA metabolic process 7.14% (5/70) 2.82 0.000723 0.01096
GO:0036094 small molecule binding 14.29% (10/70) 1.67 0.001094 0.013272
GO:0017076 purine nucleotide binding 12.86% (9/70) 1.73 0.001479 0.014952
GO:0032555 purine ribonucleotide binding 12.86% (9/70) 1.74 0.001426 0.01527
GO:0035639 purine ribonucleoside triphosphate binding 12.86% (9/70) 1.75 0.001365 0.015531
GO:0097367 carbohydrate derivative binding 12.86% (9/70) 1.7 0.001729 0.015729
GO:0006364 rRNA processing 2.86% (2/70) 4.94 0.001927 0.015942
GO:0016072 rRNA metabolic process 2.86% (2/70) 4.94 0.001927 0.015942
GO:0032553 ribonucleotide binding 12.86% (9/70) 1.7 0.001693 0.016213
GO:0005488 binding 27.14% (19/70) 0.98 0.002249 0.017795
GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity 1.43% (1/70) 8.46 0.002834 0.02063
GO:0030515 snoRNA binding 1.43% (1/70) 8.46 0.002834 0.02063
GO:0043168 anion binding 12.86% (9/70) 1.58 0.002956 0.020689
GO:1990904 ribonucleoprotein complex 4.29% (3/70) 3.31 0.003504 0.023619
GO:0008033 tRNA processing 2.86% (2/70) 4.42 0.003949 0.025668
GO:0006098 pentose-phosphate shunt 1.43% (1/70) 7.46 0.00566 0.02943
GO:0030490 maturation of SSU-rRNA 1.43% (1/70) 7.46 0.00566 0.02943
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.43% (1/70) 7.46 0.00566 0.02943
GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity 1.43% (1/70) 7.46 0.00566 0.02943
GO:0030688 preribosome, small subunit precursor 1.43% (1/70) 7.46 0.00566 0.02943
GO:0016423 tRNA (guanine) methyltransferase activity 1.43% (1/70) 7.46 0.00566 0.02943
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity 1.43% (1/70) 7.46 0.00566 0.02943
GO:0030554 adenyl nucleotide binding 10.0% (7/70) 1.59 0.008637 0.038339
GO:0032559 adenyl ribonucleotide binding 10.0% (7/70) 1.59 0.008528 0.038803
GO:0043167 ion binding 14.29% (10/70) 1.26 0.008523 0.039775
GO:0003723 RNA binding 4.29% (3/70) 2.8 0.009254 0.040101
GO:0051156 glucose 6-phosphate metabolic process 1.43% (1/70) 6.88 0.008478 0.040603
GO:0008175 tRNA methyltransferase activity 1.43% (1/70) 6.88 0.008478 0.040603
GO:0005524 ATP binding 10.0% (7/70) 1.6 0.008208 0.041498
GO:0008144 drug binding 10.0% (7/70) 1.53 0.010391 0.043983
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_26 0.067 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_224 0.026 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_29 0.049 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_147 0.068 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_199 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_6 0.037 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_108 0.028 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_136 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_159 0.028 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_26 0.086 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_83 0.054 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_9 0.025 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_11 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_13 0.045 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_96 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_82 0.042 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_249 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_289 0.024 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_1 0.024 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_8 0.025 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_19 0.038 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_45 0.032 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_47 0.037 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_23 0.022 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_87 0.019 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_117 0.024 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_166 0.037 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_211 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_229 0.032 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_298 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_59 0.1 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_181 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_29 0.019 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_109 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_154 0.045 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_170 0.041 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_349 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_382 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_385 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_459 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_38 0.027 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_100 0.023 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_4 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_73 0.033 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0079 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0009 0.042 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0024 0.028 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0071 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0083 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0118 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0132 0.05 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_10 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_24 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_58 0.056 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.032 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_175 0.028 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_181 0.065 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_187 0.034 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_238 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_264 0.031 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_28 0.056 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_40 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_72 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_297 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_1 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_66 0.039 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_75 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_124 0.026 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_125 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_164 0.068 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_174 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_45 0.079 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_75 0.028 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_97 0.027 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_122 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_138 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_201 0.03 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_11 0.036 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_79 0.03 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_114 0.034 Orthogroups_2024-Update Compare
Sequences (70) (download table)

InterPro Domains

GO Terms

Family Terms