Coexpression cluster: Cluster_19 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006364 rRNA processing 3.33% (6/180) 3.8 3e-06 0.000535
GO:0016072 rRNA metabolic process 3.33% (6/180) 3.8 3e-06 0.000535
GO:0034470 ncRNA processing 4.44% (8/180) 3.01 5e-06 0.000663
GO:0034660 ncRNA metabolic process 5.56% (10/180) 2.45 1.3e-05 0.001252
GO:0003676 nucleic acid binding 13.89% (25/180) 1.29 2.6e-05 0.001995
GO:0043229 intracellular organelle 7.22% (13/180) 1.77 0.00011 0.006068
GO:0043226 organelle 7.22% (13/180) 1.77 0.00011 0.006068
GO:0016070 RNA metabolic process 7.22% (13/180) 1.48 0.000801 0.030917
GO:1901363 heterocyclic compound binding 21.67% (39/180) 0.74 0.000737 0.031603
GO:0097159 organic cyclic compound binding 21.67% (39/180) 0.74 0.000737 0.031603
GO:0003723 RNA binding 5.0% (9/180) 1.76 0.001309 0.038865
GO:0006396 RNA processing 4.44% (8/180) 1.91 0.001281 0.0412
GO:0044464 cell part 11.11% (20/180) 1.08 0.001185 0.041598
GO:0043227 membrane-bounded organelle 3.89% (7/180) 2.0 0.001741 0.042007
GO:0043231 intracellular membrane-bounded organelle 3.89% (7/180) 2.0 0.001741 0.042007
GO:0005634 nucleus 3.33% (6/180) 2.19 0.001913 0.04343
GO:0046483 heterocycle metabolic process 11.11% (20/180) 1.04 0.001598 0.044063
GO:1901360 organic cyclic compound metabolic process 11.11% (20/180) 1.01 0.002182 0.046802
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_19 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_26 0.077 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_55 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_224 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_29 0.049 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_122 0.031 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_147 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_170 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_199 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_6 0.043 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_66 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_72 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_108 0.028 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_26 0.072 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_83 0.025 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_13 0.038 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_52 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_55 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_64 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_94 0.023 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_54 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_90 0.019 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_82 0.032 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_184 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_249 0.029 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_46 0.023 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_87 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_222 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_59 0.052 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_188 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_219 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_109 0.034 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_154 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_385 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_459 0.028 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_58 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_80 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_99 0.023 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_160 0.023 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_13 0.041 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_47 0.04 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_95 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_108 0.038 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_145 0.027 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_49 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_73 0.041 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_215 0.022 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0059 0.032 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0075 0.026 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0009 0.044 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0024 0.028 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0028 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0097 0.027 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0118 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_8 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_24 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_32 0.037 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_58 0.037 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_102 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.031 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_175 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_181 0.052 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_212 0.031 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_264 0.03 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_28 0.035 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_40 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_206 0.028 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_46 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_66 0.057 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_75 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_163 0.033 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_164 0.051 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_45 0.059 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_75 0.05 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_108 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_265 0.028 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_74 0.022 Orthogroups_2024-Update Compare
Sequences (180) (download table)

InterPro Domains

GO Terms

Family Terms