Coexpression cluster: Cluster_90 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044444 cytoplasmic part 11.06% (22/199) 3.12 0.0 0.0
GO:0044424 intracellular part 13.57% (27/199) 2.2 0.0 0.0
GO:0044464 cell part 14.07% (28/199) 2.07 0.0 0.0
GO:0032991 protein-containing complex 11.06% (22/199) 2.45 0.0 0.0
GO:0044429 mitochondrial part 3.52% (7/199) 4.91 0.0 0.0
GO:1990904 ribonucleoprotein complex 6.53% (13/199) 3.08 0.0 0.0
GO:0044422 organelle part 6.53% (13/199) 2.85 0.0 2e-06
GO:0044446 intracellular organelle part 6.53% (13/199) 2.85 0.0 2e-06
GO:0043043 peptide biosynthetic process 5.53% (11/199) 2.97 0.0 6e-06
GO:0009059 macromolecule biosynthetic process 7.04% (14/199) 2.54 0.0 6e-06
GO:0006412 translation 5.53% (11/199) 2.98 0.0 6e-06
GO:0003735 structural constituent of ribosome 5.53% (11/199) 2.95 0.0 7e-06
GO:0005840 ribosome 5.53% (11/199) 3.0 0.0 7e-06
GO:0043228 non-membrane-bounded organelle 5.53% (11/199) 2.89 0.0 8e-06
GO:0043232 intracellular non-membrane-bounded organelle 5.53% (11/199) 2.89 0.0 8e-06
GO:0043604 amide biosynthetic process 5.53% (11/199) 2.91 0.0 9e-06
GO:0006518 peptide metabolic process 5.53% (11/199) 2.88 0.0 9e-06
GO:0022900 electron transport chain 2.01% (4/199) 5.88 0.0 9e-06
GO:0034641 cellular nitrogen compound metabolic process 9.05% (18/199) 2.04 0.0 1e-05
GO:0005198 structural molecule activity 5.53% (11/199) 2.83 0.0 1e-05
GO:0034645 cellular macromolecule biosynthetic process 6.53% (13/199) 2.53 0.0 1e-05
GO:0043603 cellular amide metabolic process 5.53% (11/199) 2.81 1e-06 1.1e-05
GO:0043226 organelle 7.54% (15/199) 2.22 1e-06 1.7e-05
GO:0043229 intracellular organelle 7.54% (15/199) 2.22 1e-06 1.7e-05
GO:0005575 cellular_component 17.59% (35/199) 1.26 1e-06 1.9e-05
GO:0044271 cellular nitrogen compound biosynthetic process 6.03% (12/199) 2.22 1.2e-05 0.000186
GO:0043632 modification-dependent macromolecule catabolic process 2.51% (5/199) 3.92 2e-05 0.000282
GO:0006511 ubiquitin-dependent protein catabolic process 2.51% (5/199) 3.92 2e-05 0.000282
GO:0019941 modification-dependent protein catabolic process 2.51% (5/199) 3.92 2e-05 0.000282
GO:1901566 organonitrogen compound biosynthetic process 5.53% (11/199) 2.19 3.5e-05 0.000479
GO:0044265 cellular macromolecule catabolic process 2.51% (5/199) 3.73 3.7e-05 0.000496
GO:0044248 cellular catabolic process 3.52% (7/199) 2.86 5.4e-05 0.000702
GO:0070469 respiratory chain 1.01% (2/199) 7.05 5.6e-05 0.000711
GO:0051603 proteolysis involved in cellular protein catabolic process 2.51% (5/199) 3.57 6.4e-05 0.000786
GO:0006091 generation of precursor metabolites and energy 2.01% (4/199) 4.1 8.4e-05 0.000993
GO:0044249 cellular biosynthetic process 7.04% (14/199) 1.74 9.2e-05 0.001061
GO:1901575 organic substance catabolic process 3.52% (7/199) 2.72 9.9e-05 0.001118
GO:0009056 catabolic process 3.52% (7/199) 2.69 0.000113 0.001242
GO:0016272 prefoldin complex 1.01% (2/199) 6.47 0.000168 0.00175
GO:0009063 cellular amino acid catabolic process 1.01% (2/199) 6.47 0.000168 0.00175
GO:1901576 organic substance biosynthetic process 7.04% (14/199) 1.64 0.000179 0.001815
GO:0031966 mitochondrial membrane 1.51% (3/199) 4.55 0.000264 0.002618
GO:0030964 NADH dehydrogenase complex 1.01% (2/199) 6.05 0.000335 0.002964
GO:0005747 mitochondrial respiratory chain complex I 1.01% (2/199) 6.05 0.000335 0.002964
GO:0045271 respiratory chain complex I 1.01% (2/199) 6.05 0.000335 0.002964
GO:0019866 organelle inner membrane 1.01% (2/199) 6.05 0.000335 0.002964
GO:0005743 mitochondrial inner membrane 1.01% (2/199) 6.05 0.000335 0.002964
GO:0031090 organelle membrane 1.51% (3/199) 4.39 0.000372 0.003228
GO:0009058 biosynthetic process 7.04% (14/199) 1.51 0.000456 0.003875
GO:0016054 organic acid catabolic process 1.01% (2/199) 5.73 0.000555 0.004126
GO:0098803 respiratory chain complex 1.01% (2/199) 5.73 0.000555 0.004126
GO:0005759 mitochondrial matrix 1.01% (2/199) 5.73 0.000555 0.004126
GO:0031974 membrane-enclosed lumen 1.01% (2/199) 5.73 0.000555 0.004126
GO:0043233 organelle lumen 1.01% (2/199) 5.73 0.000555 0.004126
GO:0046395 carboxylic acid catabolic process 1.01% (2/199) 5.73 0.000555 0.004126
GO:0070013 intracellular organelle lumen 1.01% (2/199) 5.73 0.000555 0.004126
GO:0009057 macromolecule catabolic process 2.51% (5/199) 2.84 0.000699 0.00501
GO:0098796 membrane protein complex 2.51% (5/199) 2.84 0.000699 0.00501
GO:0098800 inner mitochondrial membrane protein complex 1.01% (2/199) 5.05 0.001532 0.010623
GO:0044237 cellular metabolic process 15.08% (30/199) 0.83 0.00153 0.010785
GO:0044455 mitochondrial membrane part 1.01% (2/199) 4.88 0.00196 0.013368
GO:0005622 intracellular 2.51% (5/199) 2.46 0.002256 0.01514
GO:0098798 mitochondrial protein complex 1.01% (2/199) 4.73 0.002438 0.015604
GO:0044282 small molecule catabolic process 1.01% (2/199) 4.73 0.002438 0.015604
GO:0005739 mitochondrion 1.01% (2/199) 4.73 0.002438 0.015604
GO:0009987 cellular process 17.09% (34/199) 0.72 0.002532 0.015957
GO:0007034 vacuolar transport 1.01% (2/199) 4.59 0.002965 0.018411
GO:0006520 cellular amino acid metabolic process 2.01% (4/199) 2.7 0.003448 0.021092
GO:1990204 oxidoreductase complex 1.01% (2/199) 4.25 0.004834 0.029142
GO:0019825 oxygen binding 0.5% (1/199) 7.05 0.007527 0.035993
GO:0008250 oligosaccharyltransferase complex 0.5% (1/199) 7.05 0.007527 0.035993
GO:0033180 proton-transporting V-type ATPase, V1 domain 0.5% (1/199) 7.05 0.007527 0.035993
GO:0006310 DNA recombination 0.5% (1/199) 7.05 0.007527 0.035993
GO:0019905 syntaxin binding 0.5% (1/199) 7.05 0.007527 0.035993
GO:0000149 SNARE binding 0.5% (1/199) 7.05 0.007527 0.035993
GO:0071821 FANCM-MHF complex 0.5% (1/199) 7.05 0.007527 0.035993
GO:0000098 sulfur amino acid catabolic process 0.5% (1/199) 7.05 0.007527 0.035993
GO:0008137 NADH dehydrogenase (ubiquinone) activity 0.5% (1/199) 7.05 0.007527 0.035993
GO:0030329 prenylcysteine metabolic process 0.5% (1/199) 7.05 0.007527 0.035993
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 0.5% (1/199) 7.05 0.007527 0.035993
GO:0003954 NADH dehydrogenase activity 0.5% (1/199) 7.05 0.007527 0.035993
GO:0050136 NADH dehydrogenase (quinone) activity 0.5% (1/199) 7.05 0.007527 0.035993
GO:0030328 prenylcysteine catabolic process 0.5% (1/199) 7.05 0.007527 0.035993
GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity 0.5% (1/199) 7.05 0.007527 0.035993
GO:0034660 ncRNA metabolic process 1.51% (3/199) 2.99 0.00635 0.037203
GO:0044432 endoplasmic reticulum part 1.01% (2/199) 4.05 0.006311 0.037508
GO:0044451 nucleoplasm part 1.01% (2/199) 3.88 0.007968 0.037667
GO:0044428 nuclear part 1.51% (3/199) 2.94 0.007081 0.040915
GO:0016070 RNA metabolic process 2.51% (5/199) 1.95 0.009891 0.045718
GO:0090304 nucleic acid metabolic process 3.02% (6/199) 1.73 0.009862 0.046097
GO:0043039 tRNA aminoacylation 1.01% (2/199) 3.66 0.010776 0.047187
GO:0004812 aminoacyl-tRNA ligase activity 1.01% (2/199) 3.66 0.010776 0.047187
GO:0016875 ligase activity, forming carbon-oxygen bonds 1.01% (2/199) 3.66 0.010776 0.047187
GO:0043038 amino acid activation 1.01% (2/199) 3.66 0.010776 0.047187
GO:0006418 tRNA aminoacylation for protein translation 1.01% (2/199) 3.66 0.010776 0.047187
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_23 0.026 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_55 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_75 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_102 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_52 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_58 0.028 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_69 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_84 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_110 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_2 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_3 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_10 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_34 0.031 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_53 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_99 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_104 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_239 0.023 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_22 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_24 0.022 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_47 0.025 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_98 0.024 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_7 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_46 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_87 0.027 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_19 0.019 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_25 0.03 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_54 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_7 0.029 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_26 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_45 0.027 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_90 0.033 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_121 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_133 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_169 0.029 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_193 0.027 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_251 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_33 0.025 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_49 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_53 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_239 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_44 0.041 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_71 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_110 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_311 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_334 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_408 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_29 0.027 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_50 0.033 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_55 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_70 0.03 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_86 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_88 0.027 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_113 0.029 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_119 0.03 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_144 0.024 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_21 0.028 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_35 0.033 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_61 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_107 0.025 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0049 0.024 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0083 0.03 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0116 0.022 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0117 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0027 0.028 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0033 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0056 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0085 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0108 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0128 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_8 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_10 0.028 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_24 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_35 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_98 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_102 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_135 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_194 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_212 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_266 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_40 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_67 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_76 0.026 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_145 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_168 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_174 0.035 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_234 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_268 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_277 0.024 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_24 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_43 0.03 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_56 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_102 0.029 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_124 0.03 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_37 0.027 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_41 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_69 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_75 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_107 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_111 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_176 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_265 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_11 0.029 Orthogroups_2024-Update Compare
Sequences (199) (download table)

InterPro Domains

GO Terms

Family Terms