Coexpression cluster: Cluster_524 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003723 RNA binding 13.33% (6/45) 3.79 5e-06 0.001008
GO:0016874 ligase activity 8.89% (4/45) 4.69 1.8e-05 0.001329
GO:0003743 translation initiation factor activity 6.67% (3/45) 6.03 1.4e-05 0.001525
GO:1901564 organonitrogen compound metabolic process 28.89% (13/45) 1.79 5.2e-05 0.001634
GO:0005524 ATP binding 22.22% (10/45) 2.12 7.5e-05 0.001652
GO:0006807 nitrogen compound metabolic process 31.11% (14/45) 1.66 6.8e-05 0.001672
GO:0003676 nucleic acid binding 24.44% (11/45) 2.11 3.2e-05 0.001763
GO:0008135 translation factor activity, RNA binding 6.67% (3/45) 5.28 6.6e-05 0.001826
GO:0097159 organic cyclic compound binding 37.78% (17/45) 1.46 5e-05 0.001846
GO:1901363 heterocyclic compound binding 37.78% (17/45) 1.46 5e-05 0.001846
GO:0008144 drug binding 22.22% (10/45) 2.05 0.00011 0.002209
GO:0005488 binding 48.89% (22/45) 1.06 0.000172 0.003151
GO:0030554 adenyl nucleotide binding 22.22% (10/45) 1.92 0.000231 0.003385
GO:0035639 purine ribonucleoside triphosphate binding 22.22% (10/45) 1.94 0.000205 0.00347
GO:0032559 adenyl ribonucleotide binding 22.22% (10/45) 1.92 0.000227 0.00357
GO:0003674 molecular_function 66.67% (30/45) 0.74 0.000262 0.0036
GO:0097367 carbohydrate derivative binding 22.22% (10/45) 1.75 0.000577 0.005768
GO:0032553 ribonucleotide binding 22.22% (10/45) 1.76 0.000564 0.005908
GO:0017076 purine nucleotide binding 22.22% (10/45) 1.76 0.00056 0.006162
GO:0032555 purine ribonucleotide binding 22.22% (10/45) 1.77 0.000535 0.006198
GO:0043170 macromolecule metabolic process 26.67% (12/45) 1.56 0.000511 0.006242
GO:0044237 cellular metabolic process 28.89% (13/45) 1.47 0.000488 0.006312
GO:0071704 organic substance metabolic process 31.11% (14/45) 1.31 0.000889 0.008505
GO:0000166 nucleotide binding 22.22% (10/45) 1.63 0.001099 0.009672
GO:1901265 nucleoside phosphate binding 22.22% (10/45) 1.63 0.001099 0.009672
GO:0016879 ligase activity, forming carbon-nitrogen bonds 4.44% (2/45) 5.29 0.001215 0.01028
GO:0043168 anion binding 22.22% (10/45) 1.6 0.001335 0.010874
GO:0036094 small molecule binding 22.22% (10/45) 1.58 0.001487 0.011682
GO:0004826 phenylalanine-tRNA ligase activity 2.22% (1/45) 9.2 0.001702 0.012908
GO:0006418 tRNA aminoacylation for protein translation 4.44% (2/45) 4.91 0.002041 0.014487
GO:0044238 primary metabolic process 28.89% (13/45) 1.25 0.002016 0.014785
GO:0006432 phenylalanyl-tRNA aminoacylation 2.22% (1/45) 8.61 0.002551 0.015591
GO:0043038 amino acid activation 4.44% (2/45) 4.76 0.002531 0.015907
GO:0043039 tRNA aminoacylation 4.44% (2/45) 4.76 0.002531 0.015907
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.44% (2/45) 4.77 0.002474 0.016492
GO:0004812 aminoacyl-tRNA ligase activity 4.44% (2/45) 4.77 0.002474 0.016492
GO:0034641 cellular nitrogen compound metabolic process 13.33% (6/45) 2.04 0.003158 0.018778
GO:0009987 cellular process 28.89% (13/45) 1.15 0.003763 0.021786
GO:0004363 glutathione synthase activity 2.22% (1/45) 7.88 0.004248 0.022254
GO:0006750 glutathione biosynthetic process 2.22% (1/45) 7.88 0.004248 0.022254
GO:0019184 nonribosomal peptide biosynthetic process 2.22% (1/45) 7.88 0.004248 0.022254
GO:0019538 protein metabolic process 20.0% (9/45) 1.49 0.003993 0.022527
GO:0008152 metabolic process 33.33% (15/45) 1.0 0.004881 0.024971
GO:0140101 catalytic activity, acting on a tRNA 4.44% (2/45) 4.19 0.00546 0.027299
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 2.22% (1/45) 7.39 0.005943 0.028423
GO:0061505 DNA topoisomerase II activity 2.22% (1/45) 7.39 0.005943 0.028423
GO:0006749 glutathione metabolic process 2.22% (1/45) 7.2 0.006789 0.031779
GO:0006399 tRNA metabolic process 4.44% (2/45) 3.97 0.007307 0.033491
GO:0017056 structural constituent of nuclear pore 2.22% (1/45) 7.03 0.007635 0.033592
GO:0003883 CTP synthase activity 2.22% (1/45) 7.03 0.007635 0.033592
GO:0042623 ATPase activity, coupled 4.44% (2/45) 3.89 0.008174 0.035259
GO:0043167 ion binding 24.44% (11/45) 1.12 0.00964 0.040783
GO:0006221 pyrimidine nucleotide biosynthetic process 2.22% (1/45) 6.5 0.011009 0.044038
GO:0006220 pyrimidine nucleotide metabolic process 2.22% (1/45) 6.5 0.011009 0.044038
GO:0004177 aminopeptidase activity 2.22% (1/45) 6.5 0.011009 0.044038
GO:0005643 nuclear pore 2.22% (1/45) 6.39 0.011851 0.045742
GO:0034660 ncRNA metabolic process 4.44% (2/45) 3.61 0.011722 0.046051
GO:0005086 ARF guanyl-nucleotide exchange factor activity 2.22% (1/45) 6.2 0.013533 0.04652
GO:0032012 regulation of ARF protein signal transduction 2.22% (1/45) 6.2 0.013533 0.04652
GO:0051056 regulation of small GTPase mediated signal transduction 2.22% (1/45) 6.2 0.013533 0.04652
GO:0046578 regulation of Ras protein signal transduction 2.22% (1/45) 6.2 0.013533 0.04652
GO:1902531 regulation of intracellular signal transduction 2.22% (1/45) 6.2 0.013533 0.04652
GO:0006139 nucleobase-containing compound metabolic process 8.89% (4/45) 2.1 0.01383 0.046809
GO:0006265 DNA topological change 2.22% (1/45) 6.29 0.012693 0.047328
GO:0003916 DNA topoisomerase activity 2.22% (1/45) 6.29 0.012693 0.047328
GO:0016881 acid-amino acid ligase activity 2.22% (1/45) 6.11 0.014373 0.04791
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_14 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_129 0.025 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_173 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_184 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_228 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_279 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_110 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_158 0.024 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_170 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_177 0.03 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_234 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_337 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_22 0.028 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_68 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_77 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_108 0.033 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_152 0.02 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_163 0.02 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_167 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_233 0.034 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_245 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_253 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_281 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_516 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_96 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_184 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_187 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_204 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_212 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_217 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_231 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_255 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_327 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_104 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_252 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_278 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_321 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_419 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_467 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_474 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_475 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_490 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_502 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_526 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_78 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_113 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_164 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_49 0.023 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_130 0.027 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_137 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_210 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0074 0.024 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0057 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0093 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_79 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_85 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_88 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_102 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_130 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_185 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_228 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_248 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_284 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_297 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_42 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_85 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_95 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_155 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_297 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_308 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_129 0.029 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_251 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_2 0.03 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_22 0.021 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_23 0.022 Orthogroups_2024-Update Compare
Sequences (45) (download table)

InterPro Domains

GO Terms

Family Terms