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  5. Seita.5G079000.1

Seita.5G079000.1


Description : HD-ZIP IV-type transcription factor


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G079000.1
Cluster HCAA Clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
403927 No alias homeodomain GLABROUS 2 0.03 Orthogroups_2024-Update
A4A49_31875 No alias homeobox-leucine zipper protein meristem l1 0.02 Orthogroups_2024-Update
Bradi5g22570 No alias protodermal factor 2 0.03 Orthogroups_2024-Update
Glyma.03G016600 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.04 Orthogroups_2024-Update
HORVU5Hr1G080700.2 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Seita.7G203300.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G065300.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Sopen02g024970 No alias START domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008289 lipid binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 316 547
IPR001356 Homeobox_dom 99 154
No external refs found!