1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G141000.1

Seita.5G141000.1


Description : Unknown function


Gene families : OG_42_0000341 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000341_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G141000.1
Cluster HCAA Clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
A4A49_18608 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g79770 No alias CASP-like protein (DUF1677) [Source:UniProtKB/TrEMBL;Acc:Q9CA85] 0.02 Orthogroups_2024-Update
Glyma.13G355200 No alias Protein of unknown function (DUF1677) 0.05 Orthogroups_2024-Update
HORVU7Hr1G088750.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os03g46300 No alias expressed protein 0.04 Orthogroups_2024-Update
MA_6921525g0010 No alias (at1g79770 : 132.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
Potri.003G050200 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
Sobic.003G028800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc06g066530 No alias LOW QUALITY:DUF1677 family protein (AHRD V3.3 *** G7LFY6_MEDTR) 0.02 Orthogroups_2024-Update
Sopen03g039750 No alias Protein of unknown function (DUF1677) 0.02 Orthogroups_2024-Update
Sopen06g024800 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 75 162
No external refs found!