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  5. At4g26600

At4g26600


Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]


Gene families : OG_42_0005147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g26600
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
437511 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 Orthogroups_2024-Update
Bradi3g56470 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.11 Orthogroups_2024-Update
Brara.A01647.1 No alias rRNA methyltransferase *(NOP2) 0.05 Orthogroups_2024-Update
Brara.B01299.1 No alias rRNA methyltransferase *(NOP2) 0.05 Orthogroups_2024-Update
Cre06.g273413 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.05 Orthogroups_2024-Update
Glyma.08G332000 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.05 Orthogroups_2024-Update
Glyma.18G075000 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.05 Orthogroups_2024-Update
HORVU6Hr1G072030.1 No alias rRNA methyltransferase *(NOP2) 0.05 Orthogroups_2024-Update
Kfl00342_0080 kfl00342_0080_v1.1 (at4g26600 : 543.0) S-adenosyl-L-methionine-dependent... 0.04 Orthogroups_2024-Update
LOC_Os09g37860 No alias NOL1/NOP2/sun family protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp6g04100.1 No alias OLI2 LSU processome maturation factor 0.02 Orthogroups_2024-Update
PSME_00009224-RA No alias (at5g55920 : 209.0) Encodes a homolog of the S.... 0.02 Orthogroups_2024-Update
Potri.001G369600 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.06 Orthogroups_2024-Update
Pp1s230_76V6 No alias nucleolar protein 120kda 0.05 Orthogroups_2024-Update
Seita.1G301700.1 No alias rRNA methyltransferase *(NOP2) 0.07 Orthogroups_2024-Update
Sobic.004G256000.1 No alias rRNA methyltransferase *(NOP2) 0.09 Orthogroups_2024-Update
Solyc07g052110 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.05 Orthogroups_2024-Update
Sopen02g024220 No alias NOL1/NOP2/sun family 0.03 Orthogroups_2024-Update
evm.model.contig_2251.1 No alias (at5g55920 : 395.0) Encodes a homolog of the S.... 0.05 Orthogroups_2024-Update
evm.model.tig00000114.21 No alias (at4g26600 : 466.0) S-adenosyl-L-methionine-dependent... 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030014 CCR4-NOT complex IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR031341 Methyltr_RsmF_N 254 331
IPR001678 MeTrfase_RsmB/NOP2 335 545
No external refs found!