Seita.5G380000.1


Description : Unknown function


Gene families : OG_42_0004022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004022_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G380000.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Bradi2g54850 No alias Regulator of chromosome condensation (RCC1) family protein 0.06 Orthogroups_2024-Update
Brara.D00508.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G302245 No alias Regulator of chromosome condensation (RCC1) family protein 0.05 Orthogroups_2024-Update
GRMZM2G337819 No alias Regulator of chromosome condensation (RCC1) family protein 0.06 Orthogroups_2024-Update
Glyma.02G250700 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 Orthogroups_2024-Update
Glyma.07G136500 No alias Regulator of chromosome condensation (RCC1) family protein 0.04 Orthogroups_2024-Update
Glyma.11G223000 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 Orthogroups_2024-Update
Glyma.14G066000 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G085860.2 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os05g38270 No alias regulator of chromosome condensation, putative, expressed 0.03 Orthogroups_2024-Update
Potri.008G059800 No alias Regulator of chromosome condensation (RCC1) family protein 0.04 Orthogroups_2024-Update
Potri.010G199100 No alias Regulator of chromosome condensation (RCC1) family protein 0.02 Orthogroups_2024-Update
Sobic.003G354900.1 No alias Unknown function 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004359 glutaminase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042816 vitamin B6 metabolic process IEP Predicted GO
BP GO:0042819 vitamin B6 biosynthetic process IEP Predicted GO
BP GO:0042822 pyridoxal phosphate metabolic process IEP Predicted GO
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046184 aldehyde biosynthetic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 348 396
IPR000408 Reg_chr_condens 454 502
IPR000408 Reg_chr_condens 400 451
No external refs found!