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  5. Seita.5G449800.1

Seita.5G449800.1


Description : Unknown function


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G449800.1
Cluster HCAA Clusters: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
A4A49_23288 No alias compass-like h3k4 histone methylase component wdr5b 0.03 Orthogroups_2024-Update
Bradi5g13610 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G099023 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G036800 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.06G084700 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os01g13140 No alias WD domain, G-beta repeat domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10429909g0010 No alias (at5g50120 : 80.1) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
MA_137730g0010 No alias (at1g49450 : 217.0) Transducin/WD40 repeat-like... 0.03 Orthogroups_2024-Update
Potri.004G148400 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s39_313V6 No alias No description available 0.02 Orthogroups_2024-Update
Sobic.004G242900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G123000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc04g005020 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.04 Orthogroups_2024-Update
Solyc12g044320 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 179 207
IPR001680 WD40_repeat 213 247
IPR001680 WD40_repeat 348 386
No external refs found!