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  5. Seita.5G454500.1

Seita.5G454500.1


Description : Unknown function


Gene families : OG_42_0000239 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G454500.1
Cluster HCAA Clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Bradi1g04677 No alias F-box family protein 0.03 Orthogroups_2024-Update
Bradi1g31950 No alias F-box family protein 0.04 Orthogroups_2024-Update
Bradi1g47660 No alias F-box family protein 0.05 Orthogroups_2024-Update
Bradi3g41110 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Bradi3g44271 No alias F-box family protein 0.04 Orthogroups_2024-Update
Bradi3g55621 No alias Function unknown 0.03 Orthogroups_2024-Update
LOC_Os01g28360 No alias retrotransposon, putative, centromere-specific, expressed 0.04 Orthogroups_2024-Update
Sobic.002G060400.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G207500.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 10 46
No external refs found!