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  5. Seita.6G031800.1

Seita.6G031800.1


Description : Unknown function


Gene families : OG_42_0000187 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G031800.1
Cluster HCAA Clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Bradi1g18326 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g18329 No alias RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g54475 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g23030 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g23252 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU1Hr1G037320.9 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G097710.8 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G018720.7 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g09740 No alias OsFBX274 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g09790 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os11g10330 No alias OsFBX416 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g10340 No alias OsFBX417 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.1G188800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G073600.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G079201.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G072100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 149 184
No external refs found!