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At4g29240


Description : Extensin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M0F7]


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g29240
Cluster HCCA clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
At3g19020 No alias Pollen-specific leucine-rich repeat extensin-like... 0.04 Orthogroups_2024-Update
At3g22800 No alias Leucine-rich repeat extensin-like protein 6... 0.04 Orthogroups_2024-Update
At4g28380 No alias Extensin-like protein [Source:UniProtKB/TrEMBL;Acc:O49448] 0.05 Orthogroups_2024-Update
Brara.C03718.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 78 112
IPR001611 Leu-rich_rpt 187 206
No external refs found!