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  5. Seita.6G120200.1

Seita.6G120200.1


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G120200.1
Cluster HCAA Clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
417629 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
438636 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
A4A49_12162 No alias protein phosphate starvation response 1 0.04 Orthogroups_2024-Update
A4A49_41088 No alias myb family transcription factor phl5 0.02 Orthogroups_2024-Update
At1g79430 No alias Myb family transcription factor APL... 0.02 Orthogroups_2024-Update
At3g04450 No alias Myb family transcription factor PHL13... 0.03 Orthogroups_2024-Update
Bradi1g14480 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g63530 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g495100 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
GRMZM2G454449 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G250000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G281000 No alias Homeodomain-like superfamily protein 0.01 Orthogroups_2024-Update
Glyma.12G184700 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G031500 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G068100.2 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
MA_1432g0010 No alias (at3g13040 : 86.3) myb-like HTH transcriptional... 0.03 Orthogroups_2024-Update
PSME_00007590-RA No alias (at2g38300 : 112.0) myb-like HTH transcriptional... 0.02 Orthogroups_2024-Update
PSME_00043647-RA No alias (at3g24120 : 209.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
Potri.001G314800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G001100 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Potri.017G054800 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Seita.3G199300.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Seita.6G158900.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G384300.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
Sobic.002G121600.1 No alias GARP subgroup PHL transcription factor & transcription... 0.1 Orthogroups_2024-Update
Sobic.002G161800.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G132000.1 No alias KANADI-type transcription factor 0.04 Orthogroups_2024-Update
Sopen05g034340 No alias MYB-CC type transfactor, LHEQLE motif 0.04 Orthogroups_2024-Update
Sopen08g024980 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 142 187
IPR001005 SANT/Myb 50 100
No external refs found!