1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.6G141500.1

Seita.6G141500.1


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex


Gene families : OG_42_0000776 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000776_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G141500.1
Cluster HCAA Clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
Bradi1g48090 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.C03462.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Cre09.g391875 No alias Transducin/WD40 repeat-like superfamily protein 0.01 Orthogroups_2024-Update
Glyma.15G123600 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G284000 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os02g48964 No alias WD-40 repeat family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g31560 No alias WD-40 repeat family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g38880 No alias WD-40 repeat family protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.014G147400 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.2G396300.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Sobic.004G257400.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Sobic.007G123900.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.08 Orthogroups_2024-Update
Sopen09g036250 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 307 344
No external refs found!