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  5. Seita.6G153800.1

Seita.6G153800.1


Description : mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP trafficking complex


Gene families : OG_42_0001005 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001005_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Setaria italica: Seita.6G153800.1
Cluster HCAA Clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G011700.2 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 Orthogroups_2024-Update
Seita.4G053100.1 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.04 Orthogroups_2024-Update
evm.model.contig_3435.12 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 82 150
No external refs found!