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  5. Seita.6G168400.1

Seita.6G168400.1


Description : EC_3.1 hydrolase acting on ester bond & pectin methylesterase


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G168400.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
101118 No alias pectin methylesterase PCR fragment F 0.02 Orthogroups_2024-Update
114014 No alias pectin methylesterase PCR fragment F 0.04 Orthogroups_2024-Update
A4A49_03154 No alias putative pectinesterasepectinesterase inhibitor 60 0.03 Orthogroups_2024-Update
A4A49_32529 No alias putative pectinesterasepectinesterase inhibitor 28 0.03 Orthogroups_2024-Update
At3g06830 No alias Probable pectinesterase/pectinesterase inhibitor 23... 0.03 Orthogroups_2024-Update
At3g43270 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.06 Orthogroups_2024-Update
At4g02320 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A178V0A5] 0.03 Orthogroups_2024-Update
At4g33220 No alias Probable pectinesterase/pectinesterase inhibitor 44... 0.02 Orthogroups_2024-Update
Bradi2g11860 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Brara.A00470.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Brara.A03198.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Glyma.01G137700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.02G008400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.03G029400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.03G234100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.09G076100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
HORVU6Hr1G084030.3 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
LOC_Os06g09340 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
MA_101025g0010 No alias (at5g53370 : 478.0) pectin methylesterase PCR fragment F... 0.03 Orthogroups_2024-Update
MA_10434002g0010 No alias (at3g49220 : 399.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
MA_10435891g0010 No alias (o04887|pme2_citsi : 389.0) Pectinesterase-2 precursor... 0.03 Orthogroups_2024-Update
MA_51464g0010 No alias (at4g02330 : 470.0) ATPMEPCRB; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00007922-RA No alias (at1g53830 : 539.0) encodes a pectin methylesterase;... 0.02 Orthogroups_2024-Update
PSME_00029101-RA No alias (at1g53830 : 536.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
PSME_00037746-RA No alias (at4g02330 : 473.0) ATPMEPCRB; FUNCTIONS IN:... 0.05 Orthogroups_2024-Update
PSME_00039059-RA No alias (o04886|pme1_citsi : 432.0) Pectinesterase-1 precursor... 0.02 Orthogroups_2024-Update
PSME_00039060-RA No alias (o04886|pme1_citsi : 432.0) Pectinesterase-1 precursor... 0.02 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
PSME_00054240-RA No alias (at4g02330 : 483.0) ATPMEPCRB; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.011G135000 No alias methylesterase PCR A 0.02 Orthogroups_2024-Update
Potri.013G013400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.014G067100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Potri.015G127700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.015G127800 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Orthogroups_2024-Update
Seita.1G129700.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Seita.3G376400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G434800.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.004G321600.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.007G146300.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc03g083360 No alias Pectinesterase (AHRD V3.3 *** K4BIB2_SOLLC) 0.03 Orthogroups_2024-Update
Solyc06g051960 No alias Pectinesterase (AHRD V3.3 *** K4C5Y2_SOLLC) 0.03 Orthogroups_2024-Update
Solyc07g064170 No alias pectin esterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA 16Dec
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 192 503
IPR006501 Pectinesterase_inhib_dom 48 124
No external refs found!