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  5. Seita.6G173100.1

Seita.6G173100.1


Description : bifunctional ppGpp synthetase and hydrolase *(RSH)


Gene families : OG_42_0003311 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G173100.1
Cluster HCAA Clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Bradi3g37620 No alias RELA/SPOT homolog 3 0.05 Orthogroups_2024-Update
GRMZM2G021074 No alias RELA/SPOT homolog 3 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 439 548
No external refs found!