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  5. Seita.6G186800.1

Seita.6G186800.1


Description : Unknown function


Gene families : OG_42_0009661 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009661_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G186800.1
Cluster HCAA Clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Bradi3g38527 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
GRMZM2G023591 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 Orthogroups_2024-Update
HORVU0Hr1G016150.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os08g37700 No alias RNA recognition motif containing protein, putative, expressed 0.04 Orthogroups_2024-Update
Sobic.007G227600.2 No alias Unknown function 0.06 Orthogroups_2024-Update
Sopen04g029720 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 77 143
IPR000504 RRM_dom 172 242
No external refs found!