1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.6G230800.1

Seita.6G230800.1


Description : peptidyl-prolyl cis-trans isomerase *(FKBP16-3)


Gene families : OG_42_0008879 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008879_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G230800.1
Cluster HCAA Clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Kfl00060_0190 kfl00060_0190_v1.1 (at2g43560 : 169.0) FKBP-like peptidyl-prolyl cis-trans... 0.03 Orthogroups_2024-Update
LOC_Os08g42850 No alias peptidyl-prolyl cis-trans isomerase, FKBP-type,... 0.02 Orthogroups_2024-Update
Mp6g04000.1 No alias protein folding catalyst (FKBP) 0.02 Orthogroups_2024-Update
Potri.007G134600 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.1 Orthogroups_2024-Update
Potri.017G017500 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.03 Orthogroups_2024-Update
Pp1s143_175V6 No alias peptidylprolyl isomerase fkbp-type 0.05 Orthogroups_2024-Update
Sobic.007G185100.1 No alias peptidyl-prolyl cis-trans isomerase *(FKBP16-3) 0.08 Orthogroups_2024-Update
Sopen04g007060 No alias FKBP-type peptidyl-prolyl cis-trans isomerase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
MF GO:0070567 cytidylyltransferase activity IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 266 356
No external refs found!