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  5. Seita.7G045700.1

Seita.7G045700.1


Description : Unknown function


Gene families : OG_42_0002556 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G045700.1
Cluster HCAA Clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
At3g59980 No alias Nucleic acid-binding, OB-fold-like protein... 0.03 Orthogroups_2024-Update
Bradi1g55690 No alias Nucleic acid-binding, OB-fold-like protein 0.04 Orthogroups_2024-Update
Brara.I04133.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Cre01.g046652 No alias Nucleic acid-binding, OB-fold-like protein 0.02 Orthogroups_2024-Update
Cre08.g364650 No alias Nucleic acid-binding, OB-fold-like protein 0.03 Orthogroups_2024-Update
Glyma.09G227400 No alias Nucleic acid-binding, OB-fold-like protein 0.05 Orthogroups_2024-Update
Glyma.12G009400 No alias Nucleic acid-binding, OB-fold-like protein 0.07 Orthogroups_2024-Update
Kfl00003_0540 kfl00003_0540_v1.1 (at3g59980 : 177.0) Nucleic acid-binding, OB-fold-like... 0.03 Orthogroups_2024-Update
LOC_Os04g23820 No alias methionyl-tRNA synthetase, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g24710.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.05 Orthogroups_2024-Update
Potri.017G000200 No alias Nucleic acid-binding, OB-fold-like protein 0.03 Orthogroups_2024-Update
evm.model.tig00000553.11 No alias (at4g13780 : 173.0) methionine--tRNA ligase, putative /... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 104 198
No external refs found!