Seita.7G102300.1

Description : Unknown function

Gene families : OG_42_0006111 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006111_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.7G102300.1
Cluster	HCAA Clusters: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
Bradi5g10500	No alias	Photosystem II reaction center PsbP family protein	0.03	Orthogroups_2024-Update
Mp5g12900.1	No alias	PsbP domain-containing protein 2, chloroplastic...	0.03	Orthogroups_2024-Update
Sopen04g004550	No alias	PsbP	0.03	Orthogroups_2024-Update
evm.model.contig_4488.8	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	16Dec
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	16Dec
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	16Dec
CC	GO:0019898	extrinsic component of membrane	IEA	16Dec
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0004427	inorganic diphosphatase activity	IEP	Predicted GO
CC	GO:0005886	plasma membrane	IEP	Predicted GO
CC	GO:0009512	cytochrome b6f complex	IEP	Predicted GO
BP	GO:0010207	photosystem II assembly	IEP	Predicted GO
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Predicted GO
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016859	cis-trans isomerase activity	IEP	Predicted GO
CC	GO:0070069	cytochrome complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002683	PsbP	86	239

External Links

No external refs found!