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  5. Solyc03g112500

Solyc03g112500


Description : Raffinose synthase family protein (AHRD V3.3 *** A0A061FTV8_THECC)


Gene families : OG_42_0000676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g112500
Cluster HCCA clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Bradi2g04310 No alias Raffinose synthase family protein 0.04 Orthogroups_2024-Update
Glyma.17G111400 No alias Raffinose synthase family protein 0.03 Orthogroups_2024-Update
PSME_00005466-RA No alias (at5g20250 : 946.0) encodes a member of glycosyl... 0.02 Orthogroups_2024-Update
Potri.006G052800 No alias seed imbibition 2 0.02 Orthogroups_2024-Update
Potri.006G065700 No alias Raffinose synthase family protein 0.04 Orthogroups_2024-Update
Sopen03g031560 No alias Raffinose synthase or seed imbibition protein Sip1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 30 762
No external refs found!