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  5. Seita.8G002600.1

Seita.8G002600.1


Description : Unknown function


Gene families : OG_42_0004141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G002600.1
Cluster HCAA Clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Brara.C02057.1 No alias strigolactone signal modulator *(SMXL) 0.06 Orthogroups_2024-Update
Brara.I05374.1 No alias strigolactone signal modulator *(SMXL) 0.04 Orthogroups_2024-Update
Glyma.14G193900 No alias Double Clp-N motif-containing P-loop nucleoside... 0.02 Orthogroups_2024-Update
Potri.010G188200 No alias Double Clp-N motif-containing P-loop nucleoside... 0.03 Orthogroups_2024-Update
Sobic.005G002400.1 No alias strigolactone signal modulator *(SMXL) 0.05 Orthogroups_2024-Update
Solyc09g055230 No alias Double Clp-N motif-containing P-loop nucleoside... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!