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  5. Seita.8G208000.1

Seita.8G208000.1


Description : Unknown function


Gene families : OG_42_0007627 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G208000.1
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Bradi4g12180 No alias GTP-binding family protein 0.1 Orthogroups_2024-Update
Brara.E02878.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Cre16.g658450 No alias GTP-binding family protein 0.01 Orthogroups_2024-Update
Glyma.12G057600 No alias GTP-binding family protein 0.04 Orthogroups_2024-Update
Kfl00126_0010 kfl00126_0010_v1.1 (at3g12080 : 574.0) embryo defective 2738 (emb2738);... 0.02 Orthogroups_2024-Update
Potri.009G054200 No alias GTP-binding family protein 0.03 Orthogroups_2024-Update
Pp1s123_84V6 No alias gtp-binding protein 0.03 Orthogroups_2024-Update
Sobic.005G197300.1 No alias Unknown function 0.1 Orthogroups_2024-Update
Sopen11g025600 No alias KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 0.04 Orthogroups_2024-Update
evm.model.contig_2130.10 No alias (at3g12080 : 169.0) embryo defective 2738 (emb2738);... 0.03 Orthogroups_2024-Update
evm.model.contig_2130.11 No alias (at3g12080 : 186.0) embryo defective 2738 (emb2738);... 0.03 Orthogroups_2024-Update
evm.model.tig00020780.28 No alias (at3g12080 : 327.0) embryo defective 2738 (emb2738);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003919 FMN adenylyltransferase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004832 valine-tRNA ligase activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006438 valyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006073 GTP_binding_domain 165 312
IPR006073 GTP_binding_domain 374 495
IPR032859 KH_dom-like 554 635
No external refs found!