1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.8G242600.1

Seita.8G242600.1


Description : Unknown function


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G242600.1
Cluster HCAA Clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Bradi2g21360 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Bradi2g52840 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.01G035400 No alias NB-ARC domain-containing disease resistance protein 0.01 Orthogroups_2024-Update
Glyma.03G137200 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.06G318566 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.13G071900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.15G226100 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.19G135700 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.20G045600 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G087730.12 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os10g04060 No alias powdery mildew resistance protein PM3b, putative, expressed 0.02 Orthogroups_2024-Update
Seita.6G232200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G233400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G329300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G054000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G072000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G189400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g069620 No alias Disease resistance protein (AHRD V3.3 *** A0A068EUA9_SOLLC) 0.02 Orthogroups_2024-Update
Sopen11g027060 No alias NB-ARC domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008615 FNIP 1150 1185
IPR002182 NB-ARC 191 402
No external refs found!