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  5. Solyc03g112750

Solyc03g112750


Description : Tornado 1 (AHRD V3.3 *** A0A061F576_THECC)


Gene families : OG_42_0001505 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001505_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g112750
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Mp8g04240.1 No alias Protein TORNADO 1 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Mp8g15560.1 No alias Protein TORNADO 1 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.011G088200 No alias tornado 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
BP GO:0007264 small GTPase mediated signal transduction IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 408 428
IPR001611 Leu-rich_rpt 436 458
IPR032171 COR 827 995
No external refs found!