Seita.9G041200.1

Description : component *(IES2) of INO80 chromatin remodeling complex

Gene families : OG_42_0002315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002315_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.9G041200.1
Cluster	HCAA Clusters: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method
At3g06660	No alias	PAPA-1-like family protein / zinc finger (HIT type)...	0.03	Orthogroups_2024-Update
Glyma.03G220300	No alias	HIT zinc finger ;PAPA-1-like conserved region	0.04	Orthogroups_2024-Update
MA_52766g0010	No alias	(at1g56460 : 142.0) HIT zinc finger ;PAPA-1-like...	0.03	Orthogroups_2024-Update
Sobic.008G129700.1	No alias	component *(IES2) of INO80 chromatin remodeling complex	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031011	Ino80 complex	IEA	16Dec
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033202	DNA helicase complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044454	nuclear chromosome part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0070603	SWI/SNF superfamily-type complex	None	Extended
CC	GO:0097346	INO80-type complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003909	DNA ligase activity	IEP	Predicted GO
MF	GO:0003910	DNA ligase (ATP) activity	IEP	Predicted GO
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004594	pantothenate kinase activity	IEP	Predicted GO
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Predicted GO
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
BP	GO:0006310	DNA recombination	IEP	Predicted GO
BP	GO:0006338	chromatin remodeling	IEP	Predicted GO
BP	GO:0006914	autophagy	IEP	Predicted GO
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predicted GO
MF	GO:0008373	sialyltransferase activity	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Predicted GO
BP	GO:0016485	protein processing	IEP	Predicted GO
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0043631	RNA polyadenylation	IEP	Predicted GO
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO
MF	GO:0070566	adenylyltransferase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006880	INO80B_C	385	467
IPR007529	Znf_HIT	483	514

External Links

No external refs found!

Seita.9G041200.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation