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  5. Seita.9G110200.1

Seita.9G110200.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G110200.1
Cluster HCAA Clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Bradi2g60810 No alias Early-responsive to dehydration stress protein (ERD4) 0.04 Orthogroups_2024-Update
Brara.H02782.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
MA_158173g0010 No alias (at1g30360 : 759.0) early-responsive to dehydration 4... 0.02 Orthogroups_2024-Update
Pp1s53_138V6 No alias early responsive to dehydration protein 0.02 Orthogroups_2024-Update
Sobic.008G187100.1 No alias calcium-permeable channel *(OSCA) 0.05 Orthogroups_2024-Update
Sopen12g030230 No alias Domain of unknown function DUF221 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 187 344
IPR003864 RSN1_7TM 355 621
IPR032880 Csc1_N 6 166
No external refs found!