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  5. Solyc03g112880

Solyc03g112880


Description : Fasciclin-like arabinogalactan family protein (AHRD V3.3 *** A0A061GX88_THECC)


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g112880
Cluster HCCA clusters: Cluster_4

Cluster_76
Target Alias Description ECC score Gene Family Method Actions
441324 No alias FASCICLIN-like arabinogalactan protein 8 0.02 Orthogroups_2024-Update
A4A49_01102 No alias fasciclin-like arabinogalactan protein 1 0.07 Orthogroups_2024-Update
A4A49_22028 No alias fasciclin-like arabinogalactan protein 2 0.07 Orthogroups_2024-Update
A4A49_40191 No alias fasciclin-like arabinogalactan protein 8 0.03 Orthogroups_2024-Update
At4g12730 No alias Fasciclin-like arabinogalactan protein 2... 0.03 Orthogroups_2024-Update
At5g55730 No alias Fasciclin-like arabinogalactan protein 1... 0.03 Orthogroups_2024-Update
Glyma.02G308700 No alias FASCICLIN-like arabinogalactan 2 0.04 Orthogroups_2024-Update
Glyma.14G004200 No alias FASCICLIN-like arabinogalactan 2 0.02 Orthogroups_2024-Update
LOC_Os01g62380 No alias fasciclin-like arabinogalactan protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp5g10880.1 No alias fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
PSME_00021473-RA No alias (at2g45470 : 140.0) FASCICLIN-like arabinogalactan... 0.03 Orthogroups_2024-Update
PSME_00056717-RA No alias (at2g45470 : 275.0) FASCICLIN-like arabinogalactan... 0.03 Orthogroups_2024-Update
Potri.014G071700 No alias FASCICLIN-like arabinogalactan-protein 10 0.03 Orthogroups_2024-Update
Seita.3G217100.1 No alias data-toggle="tooltip" data-placement="top" title="Disabled for neighborhoods">
regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.02 Orthogroups_2024-Update
Seita.6G110400.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Solyc10g005960 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen10g001920 No alias Fasciclin domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 42 183
IPR000782 FAS1_domain 210 345
No external refs found!