1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At4g38430

At4g38430


Description : Rop guanine nucleotide exchange factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZY2]


Gene families : OG_42_0000202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g38430
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Brara.E00485.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
Brara.K01857.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.04 Orthogroups_2024-Update
Glyma.15G016200 No alias RHO guanyl-nucleotide exchange factor 12 0.03 Orthogroups_2024-Update
MA_79976g0010 No alias (at3g24620 : 322.0) Encodes a member of KPP-like gene... 0.03 Orthogroups_2024-Update
Potri.003G052600 No alias RHO guanyl-nucleotide exchange factor 12 0.04 Orthogroups_2024-Update
Pp1s28_109V6 No alias T7H20.60; hypothetical protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.2G294500.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
Solyc04g082110 No alias Rop guanine nucleotide exchange factor, putative (AHRD... 0.03 Orthogroups_2024-Update
Solyc06g066650 No alias rop guanine nucleotide exchange factor-like protein... 0.03 Orthogroups_2024-Update
Solyc12g044270 No alias rop guanine nucleotide exchange factor-like protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
InterPro domains Description Start Stop
IPR005512 PRONE_dom 89 456
No external refs found!