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  5. Seita.9G250300.1

Seita.9G250300.1


Description : night-time repressor *(COR27)


Gene families : OG_42_0003967 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G250300.1
Cluster HCAA Clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G130232 No alias Function unknown 0.05 Orthogroups_2024-Update
GRMZM5G815358 No alias cold regulated gene 27 0.05 Orthogroups_2024-Update
Glyma.14G083000 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
Glyma.17G242100 No alias cold regulated gene 27 0.03 Orthogroups_2024-Update
HORVU4Hr1G077480.3 No alias night-time repressor *(COR27) 0.03 Orthogroups_2024-Update
HORVU4Hr1G089560.2 No alias night-time repressor *(COR27) 0.05 Orthogroups_2024-Update
LOC_Os03g08580 No alias expressed protein 0.03 Orthogroups_2024-Update
Sobic.001G480400.1 No alias night-time repressor *(COR27) 0.03 Orthogroups_2024-Update
Solyc04g078880 No alias Cold regulated gene 27, putative isoform 1 (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen04g032480 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!