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  5. At4g38600

At4g38600


Description : E3 ubiquitin-protein ligase UPL3 [Source:UniProtKB/Swiss-Prot;Acc:Q6WWW4]


Gene families : OG_42_0001466 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001466_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g38600
Cluster HCCA clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Bradi3g00350 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.08 Orthogroups_2024-Update
Glyma.04G004000 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.04 Orthogroups_2024-Update
Glyma.06G003600 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.03 Orthogroups_2024-Update
Glyma.11G107500 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.03 Orthogroups_2024-Update
Glyma.12G032500 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.03 Orthogroups_2024-Update
Glyma.13G136900 No alias ubiquitin-protein ligase 4 0.03 Orthogroups_2024-Update
Kfl00965_0030 kfl00965_0030_v1.1 (at4g38600 : 514.0) encodes a member of HECT ubiquitin... 0.02 Orthogroups_2024-Update
LOC_Os05g38830 No alias HECT-domain domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10428377g0020 No alias (at4g38600 : 758.0) encodes a member of HECT ubiquitin... 0.03 Orthogroups_2024-Update
MA_62286g0020 No alias (at4g38600 : 823.0) encodes a member of HECT ubiquitin... 0.03 Orthogroups_2024-Update
PSME_00002631-RA No alias (at4g38600 : 1949.0) encodes a member of HECT ubiquitin... 0.03 Orthogroups_2024-Update
PSME_00021195-RA No alias (at4g38600 : 1459.0) encodes a member of HECT ubiquitin... 0.04 Orthogroups_2024-Update
Potri.009G134300 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.03 Orthogroups_2024-Update
Seita.3G213700.1 No alias E3 ubiquitin ligase *(UPL3) 0.05 Orthogroups_2024-Update
Seita.7G028700.1 No alias E3 ubiquitin ligase *(UPL3) 0.05 Orthogroups_2024-Update
Solyc01g111530 No alias E3 ubiquitin-protein ligase (AHRD V3.3 *** G7JNF2_MEDTR) 0.06 Orthogroups_2024-Update
Sopen10g025230 No alias HECT-domain (ubiquitin-transferase) 0.02 Orthogroups_2024-Update
evm.model.tig00020554.37 No alias (at4g38600 : 309.0) encodes a member of HECT ubiquitin... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR000569 HECT_dom 1518 1888
No external refs found!