At4g38960


Description : B-box type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:F4JUJ1]


Gene families : OG_42_0004045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g38960
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
111647 No alias B-box type zinc finger family protein 0.04 Orthogroups_2024-Update
A4A49_04905 No alias b-box zinc finger protein 19 0.08 Orthogroups_2024-Update
Bradi4g35950 No alias B-box type zinc finger family protein 0.02 Orthogroups_2024-Update
Brara.F03890.1 No alias BBX class-IV transcription factor 0.07 Orthogroups_2024-Update
Brara.H01834.1 No alias BBX class-IV transcription factor 0.07 Orthogroups_2024-Update
GRMZM2G143718 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.01G168500 No alias B-box type zinc finger family protein 0.07 Orthogroups_2024-Update
Glyma.11G074900 No alias B-box type zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.12G037200 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G081190.1 No alias BBX class-IV transcription factor 0.06 Orthogroups_2024-Update
LOC_Os09g35880 No alias B-box zinc finger family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10433513g0010 No alias (at4g38960 : 134.0) B-box type zinc finger family... 0.03 Orthogroups_2024-Update
Potri.004G162600 No alias B-box type zinc finger family protein 0.04 Orthogroups_2024-Update
Potri.009G124400 No alias B-box type zinc finger family protein 0.05 Orthogroups_2024-Update
Pp1s207_121V6 No alias F3K23.8; zinc finger (B-box type) family protein... 0.04 Orthogroups_2024-Update
Seita.2G284200.1 No alias BBX class-IV transcription factor 0.07 Orthogroups_2024-Update
Sobic.002G273300.1 No alias BBX class-IV transcription factor 0.05 Orthogroups_2024-Update
Solyc01g110370 No alias Zinc finger, B-box (AHRD V3.3 *** A0A118K2C5_CYNCS) 0.07 Orthogroups_2024-Update
Solyc02g084420 No alias B-box zinc finger family protein (AHRD V3.3 *** AT2G21320.1) 0.08 Orthogroups_2024-Update
Sopen01g052520 No alias B-box zinc finger 0.06 Orthogroups_2024-Update
Sopen02g029130 No alias B-box zinc finger 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 42
IPR000315 Znf_B-box 52 91
No external refs found!