1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g113060

Solyc03g113060


Description : ABC transporter A family protein (AHRD V3.3 *** A0A072UUA7_MEDTR)


Gene families : OG_42_0000851 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000851_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g113060
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
231453 No alias ABC2 homolog 6 0.02 Orthogroups_2024-Update
A4A49_06499 No alias abc transporter a family member 7 0.03 Orthogroups_2024-Update
Bradi3g35390 No alias ABC2 homolog 6 0.02 Orthogroups_2024-Update
Glyma.05G028500 No alias ABC2 homolog 6 0.05 Orthogroups_2024-Update
HORVU6Hr1G038520.24 No alias subfamily ABCA transporter 0.03 Orthogroups_2024-Update
Mp7g18420.1 No alias subfamily ABCA transporter 0.02 Orthogroups_2024-Update
Pp1s234_98V6 No alias abc transporter cholesterol phospholipid flippase 0.02 Orthogroups_2024-Update
Pp1s266_1V6 No alias abc transporter cholesterol phospholipid flippase 0.02 Orthogroups_2024-Update
Seita.4G229700.1 No alias subfamily ABCA transporter 0.03 Orthogroups_2024-Update
Sobic.007G120000.1 No alias subfamily ABCA transporter 0.03 Orthogroups_2024-Update
Sobic.007G120200.2 No alias subfamily ABCA transporter 0.02 Orthogroups_2024-Update
Sopen03g032140 No alias ABC transporter 0.03 Orthogroups_2024-Update
evm.model.tig00000057.67 No alias (at3g47780 : 402.0) member of ATH subfamily; ABC2... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 644 788
No external refs found!