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  5. Seita.9G341800.1

Seita.9G341800.1


Description : tobamovirus multiplication replication host factor *(TOM1)


Gene families : OG_42_0000984 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000984_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G341800.1
Cluster HCAA Clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G020281 No alias tobamovirus multiplication 1 0.03 Orthogroups_2024-Update
GRMZM2G171469 No alias tobamovirus multiplication protein 3 0.05 Orthogroups_2024-Update
Glyma.08G091200 No alias tobamovirus multiplication protein 3 0.02 Orthogroups_2024-Update
Glyma.20G010800 No alias tobamovirus multiplication protein 3 0.04 Orthogroups_2024-Update
LOC_Os02g45870 No alias tobamovirus multiplication protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g01250 No alias tobamovirus multiplication protein, putative, expressed 0.04 Orthogroups_2024-Update
Pp1s237_67V6 No alias virion binding 0.02 Orthogroups_2024-Update
Solyc01g007900 No alias Tobamovirus multiplication 1 homolog (AHRD V3.3 *** Q402F2_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g003440 No alias Protein of unknown function (DUF1084) 0.05 Orthogroups_2024-Update
evm.model.tig00020614.90 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004788 thiamine diphosphokinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
MF GO:0030975 thiamine binding IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0042357 thiamine diphosphate metabolic process IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR009457 DUF1084 26 296
No external refs found!