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  5. Seita.9G453400.1

Seita.9G453400.1


Description : telomeric dsDNA-binding protein


Gene families : OG_42_0001495 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001495_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G453400.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
A4A49_19325 No alias telomere repeat-binding protein 5 0.02 Orthogroups_2024-Update
A4A49_34234 No alias telomere repeat-binding protein 3 0.04 Orthogroups_2024-Update
At3g46590 No alias Telomere repeat-binding protein 2... 0.03 Orthogroups_2024-Update
Bradi1g66677 No alias TRF-like 2 0.04 Orthogroups_2024-Update
Brara.B00522.1 No alias telomeric dsDNA-binding protein 0.03 Orthogroups_2024-Update
GRMZM2G063151 No alias TRF-like 9 0.03 Orthogroups_2024-Update
GRMZM2G110309 No alias TRF-like 2 0.05 Orthogroups_2024-Update
Glyma.18G037900 No alias TRF-like 9 0.04 Orthogroups_2024-Update
HORVU4Hr1G059800.2 No alias telomeric dsDNA-binding protein 0.03 Orthogroups_2024-Update
PSME_00033676-RA No alias (at3g12560 : 236.0) Encodes a telomeric DNA-binding... 0.02 Orthogroups_2024-Update
Potri.006G086500 No alias TRF-like 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!