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  5. Seita.9G497100.1

Seita.9G497100.1


Description : component *(eS17) of small ribosomal-subunit (SSU) proteome


Gene families : OG_42_0002664 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G497100.1
Cluster HCAA Clusters: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
270936 No alias Ribosomal S17 family protein 0.04 Orthogroups_2024-Update
At3g10610 No alias 40S ribosomal protein S17-3... 0.07 Orthogroups_2024-Update
At5g04800 No alias 40S ribosomal protein S17-4... 0.09 Orthogroups_2024-Update
Bradi3g29060 No alias Ribosomal S17 family protein 0.05 Orthogroups_2024-Update
Brara.B00154.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.17 Orthogroups_2024-Update
Brara.C00178.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.16 Orthogroups_2024-Update
Brara.E03000.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.J02711.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.2 Orthogroups_2024-Update
Cre12.g498250 No alias Ribosomal S17 family protein 0.13 Orthogroups_2024-Update
Glyma.02G200300 No alias Ribosomal S17 family protein 0.04 Orthogroups_2024-Update
Glyma.07G219500 No alias Ribosomal S17 family protein 0.12 Orthogroups_2024-Update
Glyma.10G076400 No alias Ribosomal S17 family protein 0.09 Orthogroups_2024-Update
Glyma.20G017700 No alias Ribosomal S17 family protein 0.13 Orthogroups_2024-Update
HORVU1Hr1G042220.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Kfl00038_0080 kfl00038_0080_v1.1 (at5g04800 : 192.0) Ribosomal S17 family protein;... 0.05 Orthogroups_2024-Update
LOC_Os03g01900 No alias 40S ribosomal protein S17, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g27190 No alias 40S ribosomal protein S17, putative, expressed 0.04 Orthogroups_2024-Update
MA_184894g0010 No alias (at5g04800 : 212.0) Ribosomal S17 family protein;... 0.06 Orthogroups_2024-Update
Mp8g18950.1 No alias component RPS17 of SSU proteome 0.1 Orthogroups_2024-Update
PSME_00034734-RA No alias (at5g04800 : 198.0) Ribosomal S17 family protein;... 0.06 Orthogroups_2024-Update
Potri.010G241200 No alias Ribosomal S17 family protein 0.03 Orthogroups_2024-Update
Pp1s2_290V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s2_298V6 No alias 40s ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s39_286V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s39_287V6 No alias 40s ribosomal protein 0.06 Orthogroups_2024-Update
Pp1s76_75V6 No alias 40s ribosomal protein 0.12 Orthogroups_2024-Update
Sobic.010G076400.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.21 Orthogroups_2024-Update
Solyc05g055230 No alias 40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC) 0.15 Orthogroups_2024-Update
Solyc11g006690 No alias 40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC) 0.19 Orthogroups_2024-Update
Sopen05g033670 No alias Ribosomal S17 0.14 Orthogroups_2024-Update
Sopen10g032640 No alias Ribosomal S17 0.2 Orthogroups_2024-Update
Sopen11g002620 No alias Ribosomal S17 0.22 Orthogroups_2024-Update
evm.model.contig_2507.2 No alias (at2g05220 : 160.0) Ribosomal S17 family protein;... 0.14 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 119
No external refs found!