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  5. At5g02050

At5g02050


Description : At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]


Gene families : OG_42_0001442 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g02050
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Bradi1g42640 No alias Mitochondrial glycoprotein family protein 0.04 Orthogroups_2024-Update
Bradi2g02870 No alias Mitochondrial glycoprotein family protein 0.03 Orthogroups_2024-Update
Bradi2g02890 No alias Mitochondrial glycoprotein family protein 0.03 Orthogroups_2024-Update
Brara.C00053.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.D00387.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G011213 No alias Mitochondrial glycoprotein family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G011560.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G046980.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g05010 No alias mitochondrial glycoprotein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os01g05060 No alias mitochondrial glycoprotein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g22070 No alias mitochondrial glycoprotein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.006G090700 No alias Mitochondrial glycoprotein family protein 0.04 Orthogroups_2024-Update
Potri.010G198600 No alias Mitochondrial glycoprotein family protein 0.06 Orthogroups_2024-Update
Pp1s118_113V6 No alias contains ESTs AU108164(C53469),C27934(C53469) similar to... 0.03 Orthogroups_2024-Update
Seita.5G099100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G075200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G134100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen03g027200 No alias Mitochondrial glycoprotein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004797 thymidine kinase activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0019136 deoxynucleoside kinase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019206 nucleoside kinase activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003428 MAM33 78 265
No external refs found!