Coexpression cluster: Cluster_271 (HCCA clusters)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034243 regulation of transcription elongation from RNA polymerase II promoter 2.04% (1/49) 9.43 0.00145 0.022625
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter 2.04% (1/49) 9.43 0.00145 0.022625
GO:0032784 regulation of DNA-templated transcription, elongation 2.04% (1/49) 9.43 0.00145 0.022625
GO:0045893 positive regulation of transcription, DNA-templated 2.04% (1/49) 9.43 0.00145 0.022625
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 2.04% (1/49) 9.43 0.00145 0.022625
GO:0045944 positive regulation of transcription by RNA polymerase II 2.04% (1/49) 9.43 0.00145 0.022625
GO:0005665 RNA polymerase II, core complex 2.04% (1/49) 9.43 0.00145 0.022625
GO:0051254 positive regulation of RNA metabolic process 2.04% (1/49) 9.43 0.00145 0.022625
GO:1902680 positive regulation of RNA biosynthetic process 2.04% (1/49) 9.43 0.00145 0.022625
GO:1903508 positive regulation of nucleic acid-templated transcription 2.04% (1/49) 9.43 0.00145 0.022625
GO:0032786 positive regulation of DNA-templated transcription, elongation 2.04% (1/49) 9.43 0.00145 0.022625
GO:0043170 macromolecule metabolic process 22.45% (11/49) 1.47 0.001569 0.02294
GO:0044237 cellular metabolic process 24.49% (12/49) 1.36 0.001786 0.024585
GO:0005488 binding 40.82% (20/49) 0.88 0.002596 0.03197
GO:0140096 catalytic activity, acting on a protein 16.33% (8/49) 1.73 0.00252 0.032758
GO:0009987 cellular process 26.53% (13/49) 1.17 0.00352 0.032948
GO:0006464 cellular protein modification process 14.29% (7/49) 1.82 0.00341 0.033245
GO:0036211 protein modification process 14.29% (7/49) 1.82 0.00341 0.033245
GO:0043412 macromolecule modification 14.29% (7/49) 1.79 0.003872 0.033556
GO:0006890 retrograde vesicle-mediated transport, Golgi to ER 2.04% (1/49) 8.43 0.002899 0.033914
GO:0003676 nucleic acid binding 16.33% (8/49) 1.68 0.003068 0.034188
GO:0016772 transferase activity, transferring phosphorus-containing groups 14.29% (7/49) 1.79 0.003827 0.034439
GO:0003674 molecular_function 57.14% (28/49) 0.62 0.00337 0.035847
GO:0006366 transcription by RNA polymerase II 2.04% (1/49) 7.11 0.007231 0.038457
GO:0055029 nuclear DNA-directed RNA polymerase complex 2.04% (1/49) 7.11 0.007231 0.038457
GO:0000428 DNA-directed RNA polymerase complex 2.04% (1/49) 7.11 0.007231 0.038457
GO:0006558 L-phenylalanine metabolic process 2.04% (1/49) 7.11 0.007231 0.038457
GO:0030880 RNA polymerase complex 2.04% (1/49) 7.11 0.007231 0.038457
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 2.04% (1/49) 7.11 0.007231 0.038457
GO:0016773 phosphotransferase activity, alcohol group as acceptor 12.24% (6/49) 1.78 0.007562 0.038465
GO:1901360 organic cyclic compound metabolic process 10.2% (5/49) 2.03 0.00747 0.038842
GO:0051173 positive regulation of nitrogen compound metabolic process 2.04% (1/49) 6.62 0.010109 0.040094
GO:0031328 positive regulation of cellular biosynthetic process 2.04% (1/49) 6.62 0.010109 0.040094
GO:0061695 transferase complex, transferring phosphorus-containing groups 2.04% (1/49) 6.62 0.010109 0.040094
GO:0010628 positive regulation of gene expression 2.04% (1/49) 6.62 0.010109 0.040094
GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway 2.04% (1/49) 6.62 0.010109 0.040094
GO:0003713 transcription coactivator activity 2.04% (1/49) 6.62 0.010109 0.040094
GO:0010604 positive regulation of macromolecule metabolic process 2.04% (1/49) 6.62 0.010109 0.040094
GO:0009891 positive regulation of biosynthetic process 2.04% (1/49) 6.62 0.010109 0.040094
GO:0010557 positive regulation of macromolecule biosynthetic process 2.04% (1/49) 6.62 0.010109 0.040094
GO:0006265 DNA topological change 2.04% (1/49) 6.43 0.011545 0.040322
GO:0003916 DNA topoisomerase activity 2.04% (1/49) 6.43 0.011545 0.040322
GO:0031325 positive regulation of cellular metabolic process 2.04% (1/49) 6.43 0.011545 0.040322
GO:0006367 transcription initiation from RNA polymerase II promoter 2.04% (1/49) 6.43 0.011545 0.040322
GO:0070001 aspartic-type peptidase activity 2.04% (1/49) 6.43 0.011545 0.040322
GO:0004190 aspartic-type endopeptidase activity 2.04% (1/49) 6.43 0.011545 0.040322
GO:0009893 positive regulation of metabolic process 2.04% (1/49) 6.43 0.011545 0.040322
GO:0044238 primary metabolic process 24.49% (12/49) 1.19 0.004869 0.040691
GO:0006468 protein phosphorylation 12.24% (6/49) 1.91 0.005044 0.040696
GO:0009094 L-phenylalanine biosynthetic process 2.04% (1/49) 7.43 0.005789 0.04105
GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process 2.04% (1/49) 7.43 0.005789 0.04105
GO:0004664 prephenate dehydratase activity 2.04% (1/49) 7.43 0.005789 0.04105
GO:0016301 kinase activity 12.24% (6/49) 1.75 0.008424 0.041943
GO:0004672 protein kinase activity 12.24% (6/49) 1.89 0.005428 0.042337
GO:0006796 phosphate-containing compound metabolic process 12.24% (6/49) 1.63 0.012554 0.042574
GO:0006793 phosphorus metabolic process 12.24% (6/49) 1.63 0.012554 0.042574
GO:0030127 COPII vesicle coat 2.04% (1/49) 6.26 0.012979 0.042777
GO:0071103 DNA conformation change 2.04% (1/49) 6.26 0.012979 0.042777
GO:0071704 organic substance metabolic process 24.49% (12/49) 1.12 0.006967 0.042902
GO:1901363 heterocyclic compound binding 26.53% (13/49) 1.07 0.006625 0.043061
GO:0097159 organic cyclic compound binding 26.53% (13/49) 1.07 0.006625 0.043061
GO:0019438 aromatic compound biosynthetic process 6.12% (3/49) 2.82 0.008863 0.043207
GO:0006725 cellular aromatic compound metabolic process 10.2% (5/49) 2.05 0.006906 0.043675
GO:0016310 phosphorylation 12.24% (6/49) 1.83 0.00647 0.044526
GO:1901362 organic cyclic compound biosynthetic process 6.12% (3/49) 2.68 0.011531 0.044972
GO:0044267 cellular protein metabolic process 14.29% (7/49) 1.53 0.009827 0.045991
GO:0090304 nucleic acid metabolic process 8.16% (4/49) 2.25 0.009781 0.046709
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_48 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_91 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_213 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_227 0.026 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_279 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_66 0.031 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_68 0.027 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_119 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_166 0.03 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_170 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_177 0.029 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_212 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_307 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_323 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_334 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_361 0.03 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_387 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_402 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_33 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_35 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_57 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_107 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_118 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_119 0.027 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_165 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_226 0.023 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_163 0.033 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_216 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_218 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_269 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_69 0.026 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_153 0.024 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_245 0.019 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_248 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_294 0.024 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_58 0.024 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_138 0.028 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_195 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_2 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_126 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_140 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_165 0.031 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_232 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_69 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_112 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_118 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_128 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_148 0.028 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_168 0.03 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_169 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_201 0.025 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_207 0.026 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_224 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_242 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_113 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_115 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_142 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_186 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_194 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_209 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_255 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_265 0.03 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_335 0.029 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_340 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_356 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_374 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_392 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_398 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_419 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_428 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_443 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_458 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_469 0.03 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_470 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_472 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_490 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_491 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_509 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_16 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_29 0.025 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_37 0.027 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_39 0.026 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_49 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_73 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_80 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_95 0.038 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_123 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_161 0.03 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_175 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_5 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_62 0.026 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_83 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_109 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_133 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_134 0.029 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_157 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_159 0.027 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_211 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_215 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0017 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0057 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0111 0.024 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0113 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0125 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_59 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_146 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_148 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_157 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_175 0.034 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_185 0.039 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_193 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_233 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_238 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_280 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_315 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_320 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_343 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_350 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_356 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_360 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_367 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_4 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_117 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_118 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_124 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_146 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_223 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_242 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_252 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_280 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_300 0.026 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_305 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_309 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_69 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_144 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_182 0.029 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_226 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_246 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_51 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_68 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_141 0.034 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_170 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_221 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_226 0.033 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_230 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_242 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_249 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_74 0.031 Orthogroups_2024-Update Compare
Sequences (49) (download table)

InterPro Domains

GO Terms

Family Terms