Coexpression cluster: Cluster_36 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 11.63% (20/172) 1.61 1e-05 0.003279
GO:0005488 binding 28.49% (49/172) 0.79 5.4e-05 0.009127
GO:0003729 mRNA binding 1.16% (2/172) 6.1 0.000279 0.011841
GO:0031124 mRNA 3'-end processing 1.16% (2/172) 6.1 0.000279 0.011841
GO:0022618 ribonucleoprotein complex assembly 1.16% (2/172) 6.1 0.000279 0.011841
GO:0071826 ribonucleoprotein complex subunit organization 1.16% (2/172) 6.1 0.000279 0.011841
GO:1901363 heterocyclic compound binding 19.19% (33/172) 0.93 0.000201 0.017094
GO:0097159 organic cyclic compound binding 19.19% (33/172) 0.93 0.000201 0.017094
GO:0016070 RNA metabolic process 5.23% (9/172) 1.99 0.000473 0.017885
GO:0090304 nucleic acid metabolic process 6.4% (11/172) 1.7 0.000601 0.018569
GO:0031123 RNA 3'-end processing 1.16% (2/172) 5.69 0.000554 0.018824
GO:0032774 RNA biosynthetic process 2.33% (4/172) 2.91 0.00198 0.048092
GO:0006265 DNA topological change 1.16% (2/172) 4.88 0.001901 0.049716
GO:0003916 DNA topoisomerase activity 1.16% (2/172) 4.88 0.001901 0.049716
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA clusters Cluster_34 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_77 0.021 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_191 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_90 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_98 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_236 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_484 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_50 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_55 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_125 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_140 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_144 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_22 0.027 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0014 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_29 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_36 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_102 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_272 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_34 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_107 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_102 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_155 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_107 0.028 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_114 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_104 0.023 Orthogroups_2024-Update Compare
Sequences (172) (download table)

InterPro Domains

GO Terms

Family Terms