Coexpression cluster: Cluster_76 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043632 modification-dependent macromolecule catabolic process 6.0% (3/50) 5.81 2e-05 0.001088
GO:0006511 ubiquitin-dependent protein catabolic process 6.0% (3/50) 5.81 2e-05 0.001088
GO:0019941 modification-dependent protein catabolic process 6.0% (3/50) 5.81 2e-05 0.001088
GO:0051603 proteolysis involved in cellular protein catabolic process 6.0% (3/50) 5.2 7.3e-05 0.001508
GO:0009057 macromolecule catabolic process 6.0% (3/50) 5.2 7.3e-05 0.001508
GO:0009056 catabolic process 8.0% (4/50) 4.24 5.9e-05 0.00161
GO:1901575 organic substance catabolic process 8.0% (4/50) 4.3 5e-05 0.001646
GO:0044265 cellular macromolecule catabolic process 6.0% (3/50) 5.41 4.6e-05 0.001913
GO:0005667 transcription factor complex 4.0% (2/50) 6.3 0.000277 0.005074
GO:0044248 cellular catabolic process 6.0% (3/50) 4.06 0.000778 0.012832
GO:0061630 ubiquitin protein ligase activity 2.0% (1/50) 7.47 0.005629 0.032028
GO:0034450 ubiquitin-ubiquitin ligase activity 2.0% (1/50) 7.47 0.005629 0.032028
GO:0061659 ubiquitin-like protein ligase activity 2.0% (1/50) 7.47 0.005629 0.032028
GO:0080090 regulation of primary metabolic process 6.0% (3/50) 3.14 0.004804 0.033026
GO:0031323 regulation of cellular metabolic process 6.0% (3/50) 3.14 0.004804 0.033026
GO:0051171 regulation of nitrogen compound metabolic process 6.0% (3/50) 3.14 0.004804 0.033026
GO:0003700 DNA-binding transcription factor activity 4.0% (2/50) 4.08 0.006238 0.034308
GO:0019222 regulation of metabolic process 6.0% (3/50) 3.07 0.005496 0.034876
GO:2000112 regulation of cellular macromolecule biosynthetic process 6.0% (3/50) 3.2 0.00427 0.035225
GO:0010556 regulation of macromolecule biosynthetic process 6.0% (3/50) 3.2 0.00427 0.035225
GO:0019219 regulation of nucleobase-containing compound metabolic process 6.0% (3/50) 3.2 0.00427 0.035225
GO:0031326 regulation of cellular biosynthetic process 6.0% (3/50) 3.2 0.00427 0.035225
GO:0009889 regulation of biosynthetic process 6.0% (3/50) 3.2 0.00427 0.035225
GO:0060255 regulation of macromolecule metabolic process 6.0% (3/50) 3.08 0.005376 0.035485
GO:0010468 regulation of gene expression 6.0% (3/50) 3.16 0.004586 0.036029
GO:0003676 nucleic acid binding 14.0% (7/50) 1.87 0.00276 0.041404
GO:0051252 regulation of RNA metabolic process 6.0% (3/50) 3.24 0.003968 0.043643
GO:0006355 regulation of transcription, DNA-templated 6.0% (3/50) 3.24 0.003968 0.043643
GO:1903506 regulation of nucleic acid-templated transcription 6.0% (3/50) 3.24 0.003968 0.043643
GO:2001141 regulation of RNA biosynthetic process 6.0% (3/50) 3.24 0.003968 0.043643
GO:1901363 heterocyclic compound binding 22.0% (11/50) 1.13 0.009564 0.049314
GO:0097159 organic cyclic compound binding 22.0% (11/50) 1.13 0.009564 0.049314
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_249 0.023 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_285 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_171 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_46 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_64 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_158 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_159 0.022 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_165 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_129 0.032 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_54 0.024 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_66 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_250 0.021 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_3 0.025 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_149 0.03 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_217 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_255 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_344 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_474 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_100 0.027 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_140 0.026 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_170 0.022 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_192 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0104 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_80 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_175 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_243 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_247 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_376 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_229 0.026 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_31 0.021 Orthogroups_2024-Update Compare
Sequences (50) (download table)

InterPro Domains

GO Terms

Family Terms