Coexpression cluster: Cluster_7 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006259 DNA metabolic process 6.86% (12/175) 3.39 0.0 0.0
GO:0006270 DNA replication initiation 2.29% (4/175) 5.49 1e-06 0.00015
GO:0006275 regulation of DNA replication 1.14% (2/175) 6.66 9.7e-05 0.005225
GO:0006269 DNA replication, synthesis of RNA primer 1.14% (2/175) 6.66 9.7e-05 0.005225
GO:0003896 DNA primase activity 1.14% (2/175) 6.66 9.7e-05 0.005225
GO:0000226 microtubule cytoskeleton organization 1.14% (2/175) 6.08 0.000288 0.007787
GO:0005815 microtubule organizing center 1.14% (2/175) 6.08 0.000288 0.007787
GO:0010564 regulation of cell cycle process 1.14% (2/175) 6.08 0.000288 0.007787
GO:0051052 regulation of DNA metabolic process 1.14% (2/175) 6.08 0.000288 0.007787
GO:0090304 nucleic acid metabolic process 6.86% (12/175) 1.81 0.00018 0.008115
GO:0000808 origin recognition complex 1.14% (2/175) 5.66 0.000573 0.014066
GO:0006996 organelle organization 2.29% (4/175) 3.34 0.000634 0.01426
GO:0070925 organelle assembly 1.14% (2/175) 5.34 0.000949 0.0183
GO:0044454 nuclear chromosome part 1.14% (2/175) 5.34 0.000949 0.0183
GO:0006139 nucleobase-containing compound metabolic process 8.0% (14/175) 1.34 0.001323 0.023822
GO:0006260 DNA replication 1.71% (3/175) 3.72 0.001445 0.024388
GO:0022402 cell cycle process 1.14% (2/175) 4.86 0.001967 0.031239
GO:0051128 regulation of cellular component organization 1.14% (2/175) 4.66 0.002606 0.037026
GO:0007010 cytoskeleton organization 1.14% (2/175) 4.66 0.002606 0.037026
GO:0046483 heterocycle metabolic process 8.0% (14/175) 1.22 0.002909 0.037405
GO:0006725 cellular aromatic compound metabolic process 8.0% (14/175) 1.22 0.002867 0.038699
GO:0016043 cellular component organization 2.86% (5/175) 2.31 0.003401 0.039921
GO:1901360 organic cyclic compound metabolic process 8.0% (14/175) 1.19 0.003563 0.04008
GO:0051726 regulation of cell cycle 1.14% (2/175) 4.49 0.003328 0.040847
GO:0044430 cytoskeletal part 1.71% (3/175) 3.2 0.004142 0.041423
GO:0010824 regulation of centrosome duplication 0.57% (1/175) 6.66 0.009865 0.042277
GO:0000818 nuclear MIS12/MIND complex 0.57% (1/175) 6.66 0.009865 0.042277
GO:0010826 negative regulation of centrosome duplication 0.57% (1/175) 6.66 0.009865 0.042277
GO:2000104 negative regulation of DNA-dependent DNA replication 0.57% (1/175) 6.66 0.009865 0.042277
GO:0090329 regulation of DNA-dependent DNA replication 0.57% (1/175) 6.66 0.009865 0.042277
GO:0051053 negative regulation of DNA metabolic process 0.57% (1/175) 6.66 0.009865 0.042277
GO:0034453 microtubule anchoring 0.57% (1/175) 6.66 0.009865 0.042277
GO:0048478 replication fork protection 0.57% (1/175) 6.66 0.009865 0.042277
GO:0045005 DNA-dependent DNA replication maintenance of fidelity 0.57% (1/175) 6.66 0.009865 0.042277
GO:0046606 negative regulation of centrosome cycle 0.57% (1/175) 6.66 0.009865 0.042277
GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity 0.57% (1/175) 6.66 0.009865 0.042277
GO:0008156 negative regulation of DNA replication 0.57% (1/175) 6.66 0.009865 0.042277
GO:0006333 chromatin assembly or disassembly 0.57% (1/175) 6.66 0.009865 0.042277
GO:0070652 HAUS complex 0.57% (1/175) 6.66 0.009865 0.042277
GO:0010948 negative regulation of cell cycle process 0.57% (1/175) 6.66 0.009865 0.042277
GO:0030030 cell projection organization 0.57% (1/175) 6.66 0.009865 0.042277
GO:0044782 cilium organization 0.57% (1/175) 6.66 0.009865 0.042277
GO:0046605 regulation of centrosome cycle 0.57% (1/175) 6.66 0.009865 0.042277
GO:0051494 negative regulation of cytoskeleton organization 0.57% (1/175) 6.66 0.009865 0.042277
GO:0060271 cilium assembly 0.57% (1/175) 6.66 0.009865 0.042277
GO:0000444 MIS12/MIND type complex 0.57% (1/175) 6.66 0.009865 0.042277
GO:0070507 regulation of microtubule cytoskeleton organization 0.57% (1/175) 6.66 0.009865 0.042277
GO:0032955 regulation of division septum assembly 0.57% (1/175) 6.66 0.009865 0.042277
GO:0030031 cell projection assembly 0.57% (1/175) 6.66 0.009865 0.042277
GO:0120031 plasma membrane bounded cell projection assembly 0.57% (1/175) 6.66 0.009865 0.042277
GO:1901891 regulation of cell septum assembly 0.57% (1/175) 6.66 0.009865 0.042277
GO:0051302 regulation of cell division 0.57% (1/175) 6.66 0.009865 0.042277
GO:0036038 MKS complex 0.57% (1/175) 6.66 0.009865 0.042277
GO:0032954 regulation of cytokinetic process 0.57% (1/175) 6.66 0.009865 0.042277
GO:0032465 regulation of cytokinesis 0.57% (1/175) 6.66 0.009865 0.042277
GO:0120036 plasma membrane bounded cell projection organization 0.57% (1/175) 6.66 0.009865 0.042277
GO:0044422 organelle part 4.57% (8/175) 1.66 0.00396 0.042768
GO:0048523 negative regulation of cellular process 1.14% (2/175) 4.34 0.004133 0.042924
GO:0005634 nucleus 2.86% (5/175) 2.18 0.005064 0.048828
GO:0038024 cargo receptor activity 1.71% (3/175) 3.04 0.005732 0.049922
GO:0005044 scavenger receptor activity 1.71% (3/175) 3.04 0.005732 0.049922
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_22 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_27 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_34 0.032 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_93 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_227 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_100 0.03 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_107 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_18 0.028 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_30 0.057 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_38 0.027 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_55 0.021 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_60 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_29 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_129 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_137 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_183 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_418 0.021 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_54 0.067 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_64 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_120 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_228 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_73 0.034 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_97 0.028 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_137 0.026 Orthogroups_2024-Update Compare
Sequences (175) (download table)

InterPro Domains

GO Terms

Family Terms