Coexpression cluster: Cluster_161 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006418 tRNA aminoacylation for protein translation 5.08% (3/59) 6.0 1.4e-05 0.00045
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.08% (3/59) 6.0 1.4e-05 0.00045
GO:0043039 tRNA aminoacylation 5.08% (3/59) 6.0 1.4e-05 0.00045
GO:0004812 aminoacyl-tRNA ligase activity 5.08% (3/59) 6.0 1.4e-05 0.00045
GO:0043038 amino acid activation 5.08% (3/59) 6.0 1.4e-05 0.00045
GO:0140101 catalytic activity, acting on a tRNA 5.08% (3/59) 5.53 3.7e-05 0.000873
GO:0006520 cellular amino acid metabolic process 6.78% (4/59) 4.45 3.4e-05 0.000945
GO:0006399 tRNA metabolic process 5.08% (3/59) 5.22 7.2e-05 0.001475
GO:0034660 ncRNA metabolic process 5.08% (3/59) 4.75 0.000192 0.003521
GO:0044281 small molecule metabolic process 8.47% (5/59) 3.07 0.000319 0.004787
GO:0016874 ligase activity 5.08% (3/59) 4.51 0.000314 0.005182
GO:0006082 organic acid metabolic process 6.78% (4/59) 3.39 0.000583 0.00687
GO:0043436 oxoacid metabolic process 6.78% (4/59) 3.4 0.00057 0.007237
GO:0019752 carboxylic acid metabolic process 6.78% (4/59) 3.41 0.000558 0.007669
GO:0051536 iron-sulfur cluster binding 3.39% (2/59) 5.22 0.001309 0.013503
GO:0051540 metal cluster binding 3.39% (2/59) 5.22 0.001309 0.013503
GO:0046483 heterocycle metabolic process 8.47% (5/59) 2.54 0.001696 0.016459
GO:0006725 cellular aromatic compound metabolic process 8.47% (5/59) 2.51 0.001814 0.016628
GO:0140098 catalytic activity, acting on RNA 5.08% (3/59) 3.61 0.001923 0.016703
GO:1901360 organic cyclic compound metabolic process 8.47% (5/59) 2.46 0.002113 0.017434
GO:0004399 histidinol dehydrogenase activity 1.69% (1/59) 8.81 0.002232 0.017535
GO:0042724 thiamine-containing compound biosynthetic process 1.69% (1/59) 7.81 0.004459 0.027247
GO:0006419 alanyl-tRNA aminoacylation 1.69% (1/59) 7.81 0.004459 0.027247
GO:0004813 alanine-tRNA ligase activity 1.69% (1/59) 7.81 0.004459 0.027247
GO:0042723 thiamine-containing compound metabolic process 1.69% (1/59) 7.81 0.004459 0.027247
GO:0009228 thiamine biosynthetic process 1.69% (1/59) 7.81 0.004459 0.027247
GO:0006772 thiamine metabolic process 1.69% (1/59) 7.81 0.004459 0.027247
GO:0016070 RNA metabolic process 5.08% (3/59) 2.97 0.006737 0.039699
GO:0052803 imidazole-containing compound metabolic process 1.69% (1/59) 6.81 0.008898 0.047358
GO:0000105 histidine biosynthetic process 1.69% (1/59) 6.81 0.008898 0.047358
GO:0006547 histidine metabolic process 1.69% (1/59) 6.81 0.008898 0.047358
GO:0034641 cellular nitrogen compound metabolic process 8.47% (5/59) 1.94 0.009646 0.04974
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_97 0.023 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_266 0.027 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_272 0.026 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_284 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_288 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_88 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_101 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_52 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_72 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_79 0.026 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_48 0.021 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_152 0.022 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_202 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_25 0.024 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_69 0.03 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_153 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_86 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_97 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_253 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_367 0.022 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_404 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_76 0.036 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_242 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_206 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_244 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_286 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_296 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_461 0.026 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_42 0.025 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_23 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_70 0.031 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_78 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0128 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0072 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_66 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_390 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_42 0.029 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_76 0.031 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_119 0.023 Orthogroups_2024-Update Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms