Coexpression cluster: Cluster_257 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 59.68% (37/62) 1.05 0.0 0.000135
GO:0003824 catalytic activity 33.87% (21/62) 1.14 0.000246 0.040581
GO:0016480 negative regulation of transcription by RNA polymerase III 1.61% (1/62) 8.02 0.003839 0.043682
GO:0030490 maturation of SSU-rRNA 1.61% (1/62) 8.02 0.003839 0.043682
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.61% (1/62) 8.02 0.003839 0.043682
GO:0006359 regulation of transcription by RNA polymerase III 1.61% (1/62) 8.02 0.003839 0.043682
GO:0031464 Cul4A-RING E3 ubiquitin ligase complex 1.61% (1/62) 8.02 0.003839 0.043682
GO:0080008 Cul4-RING E3 ubiquitin ligase complex 1.61% (1/62) 8.02 0.003839 0.043682
GO:0030515 snoRNA binding 1.61% (1/62) 8.02 0.003839 0.043682
GO:0015939 pantothenate metabolic process 1.61% (1/62) 8.02 0.003839 0.043682
GO:0015940 pantothenate biosynthetic process 1.61% (1/62) 8.02 0.003839 0.043682
GO:0006807 nitrogen compound metabolic process 19.35% (12/62) 1.24 0.004091 0.045003
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_38 0.026 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_114 0.023 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_232 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_187 0.026 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_206 0.024 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_292 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_326 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_380 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_133 0.025 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_4 0.027 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_122 0.022 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_256 0.026 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_109 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_288 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_156 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_158 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_234 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_283 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_365 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_466 0.024 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_60 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_61 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_22 0.028 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_149 0.026 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_203 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_38 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_85 0.029 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_191 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_274 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_405 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_20 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_82 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_105 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_174 0.028 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_256 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_88 0.027 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_114 0.021 Orthogroups_2024-Update Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms