Coexpression cluster: Cluster_71 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0032991 protein-containing complex 14.58% (14/96) 2.61 0.0 1.8e-05
GO:0044444 cytoplasmic part 11.46% (11/96) 2.89 0.0 4.1e-05
GO:0034645 cellular macromolecule biosynthetic process 9.38% (9/96) 2.87 4e-06 0.000388
GO:0044424 intracellular part 14.58% (14/96) 2.0 1e-05 0.000573
GO:0009059 macromolecule biosynthetic process 9.38% (9/96) 2.73 9e-06 0.000618
GO:0044464 cell part 14.58% (14/96) 1.88 2.5e-05 0.001196
GO:0070069 cytochrome complex 2.08% (2/96) 7.27 5.5e-05 0.001746
GO:0098803 respiratory chain complex 2.08% (2/96) 7.27 5.5e-05 0.001746
GO:0044271 cellular nitrogen compound biosynthetic process 9.38% (9/96) 2.36 6.5e-05 0.001855
GO:0005840 ribosome 6.25% (6/96) 3.1 7.3e-05 0.00189
GO:0034641 cellular nitrogen compound metabolic process 13.54% (13/96) 1.89 4.8e-05 0.001954
GO:0006412 translation 6.25% (6/96) 3.05 8.9e-05 0.001955
GO:0003735 structural constituent of ribosome 6.25% (6/96) 3.05 8.9e-05 0.001955
GO:0043043 peptide biosynthetic process 6.25% (6/96) 2.98 0.000118 0.002418
GO:0006518 peptide metabolic process 6.25% (6/96) 2.93 0.000142 0.002708
GO:0043604 amide biosynthetic process 6.25% (6/96) 2.9 0.000155 0.002773
GO:0005198 structural molecule activity 6.25% (6/96) 2.84 0.0002 0.002867
GO:0043603 cellular amide metabolic process 6.25% (6/96) 2.84 0.0002 0.002867
GO:0043228 non-membrane-bounded organelle 6.25% (6/96) 2.79 0.000236 0.003069
GO:0043232 intracellular non-membrane-bounded organelle 6.25% (6/96) 2.79 0.000236 0.003069
GO:1990904 ribonucleoprotein complex 6.25% (6/96) 2.84 0.000195 0.003098
GO:0005622 intracellular 5.21% (5/96) 3.25 0.000186 0.003129
GO:0005575 cellular_component 18.75% (18/96) 1.22 0.000566 0.007042
GO:0044249 cellular biosynthetic process 9.38% (9/96) 1.82 0.001009 0.012025
GO:0098800 inner mitochondrial membrane protein complex 2.08% (2/96) 5.27 0.001178 0.013482
GO:1901576 organic substance biosynthetic process 9.38% (9/96) 1.76 0.001392 0.014744
GO:0044455 mitochondrial membrane part 2.08% (2/96) 5.16 0.001389 0.015277
GO:0098798 mitochondrial protein complex 2.08% (2/96) 5.05 0.001616 0.016504
GO:0043229 intracellular organelle 7.29% (7/96) 1.98 0.002011 0.019836
GO:0043226 organelle 7.29% (7/96) 1.97 0.002095 0.019975
GO:0006351 transcription, DNA-templated 3.12% (3/96) 3.49 0.002437 0.021785
GO:0097659 nucleic acid-templated transcription 3.12% (3/96) 3.49 0.002437 0.021785
GO:0009058 biosynthetic process 9.38% (9/96) 1.61 0.002767 0.023981
GO:0033566 gamma-tubulin complex localization 1.04% (1/96) 7.86 0.004308 0.024158
GO:0008274 gamma-tubulin ring complex 1.04% (1/96) 7.86 0.004308 0.024158
GO:0000931 gamma-tubulin large complex 1.04% (1/96) 7.86 0.004308 0.024158
GO:0000930 gamma-tubulin complex 1.04% (1/96) 7.86 0.004308 0.024158
GO:0048487 beta-tubulin binding 1.04% (1/96) 7.86 0.004308 0.024158
GO:0007023 post-chaperonin tubulin folding pathway 1.04% (1/96) 7.86 0.004308 0.024158
GO:0005751 mitochondrial respiratory chain complex IV 1.04% (1/96) 7.86 0.004308 0.024158
GO:0045277 respiratory chain complex IV 1.04% (1/96) 7.86 0.004308 0.024158
GO:0007021 tubulin complex assembly 1.04% (1/96) 7.86 0.004308 0.024158
GO:0045275 respiratory chain complex III 1.04% (1/96) 7.86 0.004308 0.024158
GO:0034629 cellular protein-containing complex localization 1.04% (1/96) 7.86 0.004308 0.024158
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c 1.04% (1/96) 7.86 0.004308 0.024158
GO:0005750 mitochondrial respiratory chain complex III 1.04% (1/96) 7.86 0.004308 0.024158
GO:0044450 microtubule organizing center part 1.04% (1/96) 7.86 0.004308 0.024158
GO:1901566 organonitrogen compound biosynthetic process 6.25% (6/96) 1.96 0.00461 0.025354
GO:0090304 nucleic acid metabolic process 7.29% (7/96) 1.88 0.003016 0.025373
GO:0098796 membrane protein complex 4.17% (4/96) 2.72 0.003253 0.02658
GO:0044446 intracellular organelle part 5.21% (5/96) 2.24 0.004258 0.032916
GO:0044422 organelle part 5.21% (5/96) 2.24 0.004258 0.032916
GO:0022890 inorganic cation transmembrane transporter activity 3.12% (3/96) 2.95 0.006943 0.036773
GO:0032774 RNA biosynthetic process 3.12% (3/96) 2.95 0.006943 0.036773
GO:0031503 protein-containing complex localization 1.04% (1/96) 6.86 0.008597 0.037828
GO:0000350 generation of catalytic spliceosome for second transesterification step 1.04% (1/96) 6.86 0.008597 0.037828
GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity 1.04% (1/96) 6.86 0.008597 0.037828
GO:0022904 respiratory electron transport chain 1.04% (1/96) 6.86 0.008597 0.037828
GO:0000723 telomere maintenance 1.04% (1/96) 6.86 0.008597 0.037828
GO:0000439 transcription factor TFIIH core complex 1.04% (1/96) 6.86 0.008597 0.037828
GO:0032200 telomere organization 1.04% (1/96) 6.86 0.008597 0.037828
GO:0060249 anatomical structure homeostasis 1.04% (1/96) 6.86 0.008597 0.037828
GO:0003714 transcription corepressor activity 1.04% (1/96) 6.86 0.008597 0.037828
GO:0006457 protein folding 2.08% (2/96) 3.95 0.007386 0.038405
GO:0044429 mitochondrial part 2.08% (2/96) 3.9 0.007873 0.040208
GO:0034622 cellular protein-containing complex assembly 2.08% (2/96) 3.73 0.009962 0.043169
GO:0006139 nucleobase-containing compound metabolic process 7.29% (7/96) 1.54 0.010335 0.044118
GO:0016070 RNA metabolic process 5.21% (5/96) 1.89 0.011451 0.048162
GO:0008324 cation transmembrane transporter activity 3.12% (3/96) 2.66 0.011993 0.049711
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA clusters Cluster_180 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_7 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_100 0.023 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_24 0.026 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_207 0.026 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0098 0.019 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_60 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_224 0.019 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_302 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_236 0.021 Orthogroups_2024-Update Compare
Sequences (96) (download table)

InterPro Domains

GO Terms

Family Terms